Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5837g00008 ATGACTATCGCCGGCGACATTTTCAGGCTCAATTTGCCTCAGGTTCTCGATGAATCCCCTTCCTGTTCTCAGGAGCTCCATGTTCTTGCCGTCGATGACAGTCACGTCGATCGTAAGGTCATCGAACGCCTGCTCAAAATTTCTTCTTGCAAAGTGACGGTTGTGGATAGTGGAACCAGAGCTTTGCAATACTTGGGATTAGATGGAGAGGAGAACTCCATTGGGTTTAATACTGCAAAGGTTAATCTAATCATGACGGACTATTCCATGCCGGGGATGACAGGATATGAACTTCTTAAGAAGATCAAGCAGGAGTCATCTATTTTTAGAGAGATTCCAGTGGTGATCATGTCTTCTGAGAACATTTTGACACGGATTGATAGGTGTTTGGAGGAAGGAGCAGAGGAATTTCTATTAAAGCCAGTGAAGTTATCAGATGTTAAACGATTGACTGACTTCATCATGAGGGGTGAAATGGAGGGAAAGGAGAAAAGATCTCATAAAAAAAGGCGATTTGATGATCCAAGTTCGTCTCCTTCAACACTGACCTCATCGAAGTCTCATCCATGTGATTCGTCATCACCTCGACTGTCATCATTGTCCTCCAAGAGATCTATATTACTACCAGATTTTGAATAG 639 0.4304 MTIAGDIFRLNLPQVLDESPSCSQELHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSIGFNTAKVNLIMTDYSMPGMTGYELLKKIKQESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLTDFIMRGEMEGKEKRSHKKRRFDDPSSSPSTLTSSKSHPCDSSSPRLSSLSSKRSILLPDFE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5837g00008 212 CDD REC_typeA_ARR 28 150 - -
Pral5837g00008 212 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Pral5837g00008 212 SUPERFAMILY CheY-like 25 157 IPR011006 -
Pral5837g00008 212 Gene3D - 26 200 - -
Pral5837g00008 212 SMART REC_2 26 151 IPR001789 GO:0000160
Pral5837g00008 212 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Pral5837g00008 212 MobiDBLite consensus disorder prediction 158 175 - -
Pral5837g00008 212 MobiDBLite consensus disorder prediction 158 212 - -
Pral5837g00008 212 MobiDBLite consensus disorder prediction 176 205 - -
Pral5837g00008 212 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 181 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5837g00008 Pral-Chr5837 46106 48044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5837g00008 13 169 Response Regulator Gene Family AT3G48100 73.006 3.90e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5837g00008 Response_reg 1.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5837g00008 K14492 - rcu:8258131 265.388