Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5837g00007 ATGACTATCGCCGGCGACATTTTCAGGCTCAATTTGCCTCAGGTTCTCGATGAATCCCCTTCCTGTTCTCAGGAGCTCCATGTTCTTGCCGTCGATGACAGTCACGTCGATCGTAAGGTCATCGAACGCCTGCTCAAAATTTCTTCTTGCAAAGTGACGGTTGTGGATAGTGGAACCAGAGCTTTGCAATACTTGGGATTAGATGGAGAGGAGAACTCCATTGGGTTTAATACTGCAAAGGTTAATCTAATCATGACGGACTATTCCATGCCGGGGATGACAGGATATGAACTTCTTAAGAAGATCAAGGAGTCATCTATTTTTAGAGAGATTCCAGTGGTGATCATGTCTTCTGAGAACATTTTGACACGGATTGATAGGTGTTTGGAGGAAGGAGCAGAGGAATTTCTATTAAAGCCAGTGAAGTTATCAGATGTTAAACGATTGACTGACTTCATCATGAGGGGTGAAATGGAGGGAAAGGAGAAAAGATCTCATAAAAAAAGGCGATTTGATGATCCAAGTTCGTCTCCTTCAACACTGACCTCATCGAAGTCTCATCCATGTGATTCGTCATCACCTCGACTGTCATCATTGTCCTCCAAGAGATCTATATTACTACCAGATTTTGAATAG 636 0.4292 MTIAGDIFRLNLPQVLDESPSCSQELHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSIGFNTAKVNLIMTDYSMPGMTGYELLKKIKESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLTDFIMRGEMEGKEKRSHKKRRFDDPSSSPSTLTSSKSHPCDSSSPRLSSLSSKRSILLPDFE 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5837g00007 211 MobiDBLite consensus disorder prediction 175 204 - -
Pral5837g00007 211 CDD REC_typeA_ARR 28 149 - -
Pral5837g00007 211 FunFam Response regulator 3 26 186 - -
Pral5837g00007 211 Gene3D - 26 199 - -
Pral5837g00007 211 MobiDBLite consensus disorder prediction 157 211 - -
Pral5837g00007 211 SUPERFAMILY CheY-like 25 156 IPR011006 -
Pral5837g00007 211 Pfam Response regulator receiver domain 28 147 IPR001789 GO:0000160
Pral5837g00007 211 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Pral5837g00007 211 MobiDBLite consensus disorder prediction 157 174 - -
Pral5837g00007 211 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 180 IPR045279 GO:0009736
Pral5837g00007 211 SMART REC_2 26 150 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5837g00007 Pral-Chr5837 46106 48044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5837g00007 13 168 Response Regulator Gene Family AT3G48100 73.457 6.03e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5837g00007 Response_reg 1.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5837g00007 K14492 - rcu:8258131 270.011