Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5837g00001 ATGTCACGATCACTCTCCGCCTCCTCCACCGACGGTGATGCTTCTTGCCCCGCCTCCGCCGGCGAGATCATGTTGTTCGGCGTTAGAGTCGTTGTGGATTCCATGAGGAAGTGTGTGAGTATGAACAATCTTTCGCAGTACGAGCAACCTCAGGATGGCTCAAATAACAACAAGGAAGATGTTCTCGCCGCCGGTTATGCCTCCGCCGACGATGCCGTTGTTCATAATCCCGGCAAGCACCGCGAGCGTGAGCGCAAGCGAGGGGTTCCTTGGACGGAGGAAGAACACAGGCTGTTCTTGCTGGGATTGCAGAAGGTAGGGAAGGGCGATTGGAGAGGGATCTCAAGGAACTATGTGAAAACAAGGACTCCTACACAGGTTGCGAGCCATGCTCAGAAGTACTTCCTTCGAAAAAGCAACCTTAATCGGCGACGCCGTAGATCCAGCTTATTTGACATTACCACTGACTCGGTTTCGGCAAATCTAGTGGAAGAACAGATCCAGCCTCAAGATAATATGCCTCATCCACATCTTGTGCACACTGCATCATCTGAAACCAGCAACATCAATGGATTTCCAATGATGCCACTATATCCAATGGCTGTTGGGTCTGGAGCGATTTCATTCTTGGGCAGGAATCCTGTGGAGGAGCTACCTCTGGGGCATGGAGATCCAAAAGCTTCTGCTATGTCTGATGTTGCCTTGAGTTCGAGCTCATCTCTTGATCTCCCGACGCTGTCTCTTGGACTATCCTTGTCGTCTGATCAGAGAAAGACATCATCAAGGCAATCAAGTTTACATGCACTGCCATGTCTCAACAATGGAGAAAGCATCATAAGCGTTGCTTGA 849 0.5029 MSRSLSASSTDGDASCPASAGEIMLFGVRVVVDSMRKCVSMNNLSQYEQPQDGSNNNKEDVLAAGYASADDAVVHNPGKHRERERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRKSNLNRRRRRSSLFDITTDSVSANLVEEQIQPQDNMPHPHLVHTASSETSNINGFPMMPLYPMAVGSGAISFLGRNPVEELPLGHGDPKASAMSDVALSSSSSLDLPTLSLGLSLSSDQRKTSSRQSSLHALPCLNNGESIISVA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5837g00001 282 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
Pral5837g00001 282 SMART sant 87 137 IPR001005 -
Pral5837g00001 282 ProSiteProfiles SANT domain profile. 86 139 IPR017884 -
Pral5837g00001 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Pral5837g00001 282 SUPERFAMILY Homeodomain-like 85 140 IPR009057 -
Pral5837g00001 282 CDD SANT 90 135 IPR001005 -
Pral5837g00001 282 Gene3D - 89 141 - -
Pral5837g00001 282 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Pral5837g00001 282 FunFam transcription factor MYB1R1 89 140 - -
Pral5837g00001 282 PANTHER TRANSCRIPTION FACTOR KUA1 12 229 - -
Pral5837g00001 282 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 138 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5837g00001 Pral-Chr5837 3888 6057 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5837g00001 Myb_DNA-binding 5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5837g00001 - - gmx:778059 323.553