Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5832g00003 ATGGGTTGTGTCCATGGCAAGTGTTGTCGCGGCTACATTCCGCCGTCGGAGTGTGGTGGTACTAGCAGCTGCCGCGGACTCGGCCCTCGCCGTCGCCAAAGGAAACACAAATTTACTCAAAGTTCATTGAAGTTTGCTCCTGTTCCTTCCCACAACTACGTTTTAGAATACTCGTTTCTCACACAGCAAGGATACTACCCTGATTCACCTGATAAAGAAAACCAGGATACTTTCTGTATTAGGACACAGATTCAAGGTAACCCAAACGTCCATTTTTTCGGTGTCTATGATGGGCATGGTCAATGTGGTAGCCAGTGTTCGAATTTTGTTAGGGATAGGTTGATAGAAACATTATCAAATGACCCTGCATTGTTGGAGGACCCCGGTAAAGCTTATACTTCAGCATTCTTGGCAACGAATTACCAATTACACAACAGTGATATTGATGATTCTATGAGTGGCACTACTGCAATCACAGTGCTTGTTGTTGGGGACACACTTTATGTTGCTAATGTTGGTGATTCCAGAGCGGTGCTGGCAGTAAAGGATGGGAATTGCATCGTTGCTGAGAACTTGTCTAATGATCAGACACCGTTTCGGAGAGATGAGTATGAGAGAGTGAAACTTTGTGGTGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCTAAAGGATCCGGATGTCCAAACATGGGGTGATGAAGAGAGTCAGGGAAGCGATCCTCCAAGGTTGTGGGTTCCAAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTTTAGGGGATAGTTTGGCAGAGACTATTGGTGTCATTGCTACTCCAGAAGTGTCAGTGGTTCGGCTGACACCTAATCATCTTTTCTTTATTGTGGCAAGTGATGGCATATTTGAGTTCCTATCAAGCCAAACTGTTGTTAACATGGCAGCAAGCTACACAGATCCTGGTGAAGCATGTGCTGCCATTGCTGGAGAGGCATATAAACTATGGTTGGAACATGAAAACCGAACAGATGATATAACAATTATCATAGTTCAGATCAAAGGCCTATCTAATGCAGGTACGTCTGGAGTTGGAGTAGATAATATTAATGTTAGTACGGCAACGCGGGCAAGGAGAGGAACTTCTGAAGTATCTACTACCACTTCATCGGATGTTTATTGTTCTGTGAGGAGTGAGCTCTCTGATCAACAGTGCTGTCAGAACGTAGTTTCAATGAGAAGCCCAGCTATAATTGTCCCATCTCCATCATGCCAAAGACCGGTTGAAGAGTGA 1272 0.4481 MGCVHGKCCRGYIPPSECGGTSSCRGLGPRRRQRKHKFTQSSLKFAPVPSHNYVLEYSFLTQQGYYPDSPDKENQDTFCIRTQIQGNPNVHFFGVYDGHGQCGSQCSNFVRDRLIETLSNDPALLEDPGKAYTSAFLATNYQLHNSDIDDSMSGTTAITVLVVGDTLYVANVGDSRAVLAVKDGNCIVAENLSNDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDVQTWGDEESQGSDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVIATPEVSVVRLTPNHLFFIVASDGIFEFLSSQTVVNMAASYTDPGEACAAIAGEAYKLWLEHENRTDDITIIIVQIKGLSNAGTSGVGVDNINVSTATRARRGTSEVSTTTSSDVYCSVRSELSDQQCCQNVVSMRSPAIIVPSPSCQRPVEE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5832g00003 423 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Pral5832g00003 423 Pfam Protein phosphatase 2C 78 325 IPR001932 -
Pral5832g00003 423 PANTHER PROTEIN PHOSPHATASE 61 345 IPR015655 GO:0004722|GO:0006470
Pral5832g00003 423 Gene3D - 44 348 IPR036457 -
Pral5832g00003 423 CDD PP2Cc 72 346 IPR001932 -
Pral5832g00003 423 ProSiteProfiles PPM-type phosphatase domain profile. 56 346 IPR001932 -
Pral5832g00003 423 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 51 348 - -
Pral5832g00003 423 SMART PP2C_4 48 344 IPR001932 -
Pral5832g00003 423 SUPERFAMILY PP2C-like 48 348 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5832g00003 Pral-Chr5832 12092 15970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5832g00003 1 351 PP2C-type Phosphatase Gene Family AT3G06270 68.333 4.63e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5832g00003 - - aprc:113872580 661.373