Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5832g00002 ATGGGTTGTGTCCATGGCAAGTGTTGTCGCGGCTACATTCCGCCGTCGGAGTGTGGTGGTACTAGCAGCTGCCGCGGACTCGGCCCTCGCCGTCGCCAAAGGAAACACAAATTTACTCAAAGTTCATTGAAGTTTGCTCCTGTTCCTTCCCACAACTACGTTTTAGAATACTCGTTTCTCACACAGCAAGGATACTACCCTGATTCACCTGATAAAGAAAACCAGGATACTTTCTGTATTAGGACACAGATTCAAGGTAACCCAAACGTCCATTTTTTCGGTGTCTATGATGGGCATGGTCAATGTGGTAGCCAGTGTTCGAATTTTGTTAGGGATAGGTTGATAGAAACATTATCAAATGACCCTGCATTGTTGGAGGACCCCGGTAAAGCTTATACTTCAGCATTCTTGGCAACGAATTACCAATTACACAACAGTGATATTGATGATTCTATGAGTGGCACTACTGCAATCACAGTGCTTGTTGTTGGGGACACACTTTATGTTGCTAATGTTGGTGATTCCAGAGCGGTGCTGGCAGTAAAGGATGGGAATTGCATCGTTGCTGAGAACTTGTCTAATGATCAGACACCGTTTCGGAGAGATGAGTATGAGAGAGTGAAACTTTGTGGTGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCTAAAGGATCCGGATGTCCAAACATGGGGTGATGAAGAGAGTCAGGGAAGCGATCCTCCAAGGTTGTGGGTTCCAAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTTTAGGGGATAGTTTGGCAGAGACTATTGGTGTCATTGCTACTCCAGAAGTGTCAGTGGTTCGGCTGACACCTAATCATCTTTTCTTTATTGTGGCAAGTGATGGCATATTTGAGTTCCTATCAAGCCAAACTGTTGTTAACATGGCAGGTACGTCTGGAGTTGGAGTAGATAATATTAATGTTAGTACGGCAACGCGGGCAAGGAGAGGAACTTCTGAAGTATCTACTACCACTTCATCGGATGTTTATTGTTCTGTGAGGAGTGAGCTCTCTGATCAACAGTGCTGTCAGAACGTAGTTTCAATGAGAAGCCCAGCTATAATTGTCCCATCTCCATCATGCCAAAGACCGGTTGAAGAGTGA 1140 0.4526 MGCVHGKCCRGYIPPSECGGTSSCRGLGPRRRQRKHKFTQSSLKFAPVPSHNYVLEYSFLTQQGYYPDSPDKENQDTFCIRTQIQGNPNVHFFGVYDGHGQCGSQCSNFVRDRLIETLSNDPALLEDPGKAYTSAFLATNYQLHNSDIDDSMSGTTAITVLVVGDTLYVANVGDSRAVLAVKDGNCIVAENLSNDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDVQTWGDEESQGSDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVIATPEVSVVRLTPNHLFFIVASDGIFEFLSSQTVVNMAGTSGVGVDNINVSTATRARRGTSEVSTTTSSDVYCSVRSELSDQQCCQNVVSMRSPAIIVPSPSCQRPVEE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5832g00002 379 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Pral5832g00002 379 PANTHER PROTEIN PHOSPHATASE 60 311 IPR015655 GO:0004722|GO:0006470
Pral5832g00002 379 ProSiteProfiles PPM-type phosphatase domain profile. 56 379 IPR001932 -
Pral5832g00002 379 SMART PP2C_4 48 346 IPR001932 -
Pral5832g00002 379 CDD PP2Cc 72 316 IPR001932 -
Pral5832g00002 379 Gene3D - 44 360 IPR036457 -
Pral5832g00002 379 SUPERFAMILY PP2C-like 48 320 IPR036457 -
Pral5832g00002 379 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 51 327 - -
Pral5832g00002 379 Pfam Protein phosphatase 2C 78 308 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5832g00002 Pral-Chr5832 12092 15970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5832g00002 1 309 PP2C-type Phosphatase Gene Family AT3G06270 67.296 1.44e-153 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5832g00002 - - aprc:113872580 562.762