Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5831g00021 CTAGAACCCAAATCCCCTTCTTCCAAGACCTCTGATTCAGAGAGCCAGTCAAACAATGCCCAGTGGCATGGTTTCTTTCGTTTGTTAAAGAAAGGACCCAAAATGCGTTTCCAACCCATTCTTCCACTTAAAAACGTTCCAAAACTCACCAGAAGAAATAGCAAGAGATACAGGGAGAACCAGGTCCCGCCTCTAAATTCGCCACTGAATAATCCAGCTCTCAAGACAATCTTGGACACTGAATTGTTCTGCTTCAAAGCTTCCTGGAAAAATTTCTCGCATGCAGAGATTGTGATTGCAACTAACAATTTCAGCCATGAGAATGTGATTGGTCAAGGAGGTTATGCTGTGGTTTACAAAGGCAAAATGGAAGATGGGCAGTTTGTTGCAATCAAACAGCTCACCAGAGGAACTCTAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTGCACGTGAAGCATCCCAATATTGCGAGATTGATTGGATATGGTGTTGAAGGGGGAATGTTTCTTGTTCTTCAGTTGTCTCCACACGGCAGCCTAGCATCCATACTTTATGGACCTCGAGAGAAACTTGGTTGGAGCTTAAGGTATAAGATTGCTTTTGGGACTGCTGATGGCCTTCGCTATCTGCATGAGGAATGCCAAAGAAGGATAATTCACAGAGATATCAAGGCTTCTAATATTTTGCTCTCAGAGGACTTTGAAGCTATGATATCTGATTTTGGGCTTTCAAAATGGTTACCGGACCAATGGACTCACCATACAATATCCAAAATTGAAGGCACCTTCGGCTACCTTCCTCCAGAATTCTTCATGCATGGTTTAGTAGACGAAAAGACCGATGTCTACGCTTATGGGGTTTTATTATTGGAGCTCATTACTGGACGACAAGCTTTGGATAGCTCACAGAAAAGCTTAGTGATGTGGGCAAAACCTTTGCTTTCTTCAAATAACATTAAAGAGCTTGTCGATCCATATCTGAATGGCGCTTATGATGAAGAACAAATGAAACTTGTAGTCTTAGTAGCTTCATTGTGTGTTGATCAATCCTCAGCTGAACGACCAAACATGAGCCAGGTATTAACGATTCTAAGAGGAGGAGGAGATAGCTTGGAGCTAAAGAAATTGCAACAGAAGTCCAAAATTCAAGGGACGTACTCTGAAGAACCCTTAGATGCAGAGGAGTACAACTCAACAGAGTTTTTGAATGTCCCGGATCCACATATGCAGACTCTTCACTCTTCTGGGAAGCTGTAA 1272 0.423 LEPKSPSSKTSDSESQSNNAQWHGFFRLLKKGPKMRFQPILPLKNVPKLTRRNSKRYRENQVPPLNSPLNNPALKTILDTELFCFKASWKNFSHAEIVIATNNFSHENVIGQGGYAVVYKGKMEDGQFVAIKQLTRGTLEEMTADFLSELGIIVHVKHPNIARLIGYGVEGGMFLVLQLSPHGSLASILYGPREKLGWSLRYKIAFGTADGLRYLHEECQRRIIHRDIKASNILLSEDFEAMISDFGLSKWLPDQWTHHTISKIEGTFGYLPPEFFMHGLVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSSNNIKELVDPYLNGAYDEEQMKLVVLVASLCVDQSSAERPNMSQVLTILRGGGDSLELKKLQQKSKIQGTYSEEPLDAEEYNSTEFLNVPDPHMQTLHSSGKL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5831g00021 423 SUPERFAMILY Protein kinase-like (PK-like) 85 369 IPR011009 -
Pral5831g00021 423 Gene3D Phosphorylase Kinase; domain 1 71 178 - -
Pral5831g00021 423 SMART serkin_6 104 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5831g00021 423 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 181 384 - -
Pral5831g00021 423 ProSitePatterns Protein kinases ATP-binding region signature. 110 132 IPR017441 GO:0005524
Pral5831g00021 423 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 80 179 - -
Pral5831g00021 423 Pfam Protein tyrosine and serine/threonine kinase 107 368 IPR001245 GO:0004672|GO:0006468
Pral5831g00021 423 PANTHER OS08G0249100 PROTEIN 8 401 IPR046958 -
Pral5831g00021 423 ProSiteProfiles Protein kinase domain profile. 104 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5831g00021 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Pral5831g00021 423 Gene3D Transferase(Phosphotransferase) domain 1 181 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5831g00021 Pral-Chr5831 157929 160322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5831g00021 92 385 Receptor kinase-like Gene Family AT1G53420 42.715 1.59e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral5831g00021 PK_Tyr_Ser-Thr 3.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5831g00021 - - gmx:102670300 631.328