Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5831g00001 ATGGGCTGTGTGTTCGGAAGAGAGGCGTCGGCGAAGTTTTCCGGAGAGACGGTGTTGGAGAGGGAGAAAGCGAGGGAGGAGAGGAAACAGGAAGTTGCAGCAGCGAAAGCAGAAGTGATTGAGGTTCAGAATGGTGGGAATCGGAAGGAAGGTGGAGAGGAGAAGAGTACACGTCCAAGAGGGGAAAGGCGGCGATCGTCGCGGCCAAATCCGAGGCTGAGCAATCCACCTAACCATTTACACGGCGAGCAATTGGCGGCAGGATGGCCGTCTTGGCTCTCCAAGGTTGCAGGGGAAGCCATCAACGGGTTGACGCCTAGGAGAGCTGACACTTTTGAAAAGCTTGATAAGATTGGCCAAGGCACATACAGTAATGTATACAAAGCCAGAGATAATTTAACTGGGAAAATTGTTGCCTTAAAAAAGGTTCGATTTGACAATTTGGAGCCAGAGAGTGTGAAATTCATGGCCCGAGAGATTCTCATATTACGTCGACTGGATCATCCCAATGTTGTCAAACTGGAAGGTTTAGTGACTTCTAGAATGTCATGTAGCTTGTATCTTGTTTTTCAATACATGGAGCATGATCTAGCCGGACTTGCCACAAGCCCATCAATTAAGTTCACCGAGCCTCAGGTTAAGTGTTACATGAAGCAGCTGTTTTCTGGTCTGGAACACTGTCACAACCGTCATGTGTTGCATCGAGATATAAAGGGGTCAAACCTTCTTATTGACAATGAAGGGATTCTTAAAATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTGATCACAAGCACCCTATGACAAGTAGGGTGGTGACTTTATGGTATCGACCTCCAGAACTTCTTCTCGGGGCCACTGATTATGGTGTGGGAGTGGACCTCTGGAGCGCAGGTTGCATTCTTGCAGAATTGTTGGCCGGAAAGCCAATTTTGCCTGGTAGAACAGAGGTGGAGCAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAGTATTGGAAAAAGTCAAAGTTGCCTCATGCTACCATTTTTAAGCCCCAACAATCATACAAGCGATGCATATCAGATGTATTCAAAGATTTTCCACCATCATCCTTGCCACTAATCGAGACCCTTCTTGCAATTGATCCAGCTGAACGTCAGACTGCCACTGCTGCCTTGCAAAGTGAATTCTTCACTACAAGACCTTATGCTTGTGAGCCATCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGAGATGAAGAAGCTAGAAGATTGAGAGCAGCGGGTAAAGCCAATGCTGATGGTGCTAAGAAATCTCGTCCTCGTGACCGGGGAGGGAGGGGAATTCCTGTTCCGGAAGCCAATGCTGAGCTTCAGGCAAATATTGATAGACGGCGATTGATAACGCATGCAAATGCTAAGAGCAAGAGCGAGAAGTTTCCTCCGCCCCACCAAGACGGAACTCTAGGCTATACTCTGGGTTCTTCACATCACATGGATCCAGTATTTGATCCTCCTGATGTTTCATTTAGCTCTACAAACCTGTCATACCCAAAAGCCAATATTCAAACATGGTCTGGTCCATTAGTGGAACCTGCTGGCGGGATGGGTGCCCCAAGGAGAAAGAAGAACATGGCAGGTGAATCGAAGTCGTCGAAGAAGGACTCAAAAAGATAA 1689 0.4689 MGCVFGREASAKFSGETVLEREKAREERKQEVAAAKAEVIEVQNGGNRKEGGEEKSTRPRGERRRSSRPNPRLSNPPNHLHGEQLAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDNLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFQYMEHDLAGLATSPSIKFTEPQVKCYMKQLFSGLEHCHNRHVLHRDIKGSNLLIDNEGILKIADFGLASFFDPDHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPILPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCISDVFKDFPPSSLPLIETLLAIDPAERQTATAALQSEFFTTRPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGAKKSRPRDRGGRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGTLGYTLGSSHHMDPVFDPPDVSFSSTNLSYPKANIQTWSGPLVEPAGGMGAPRRKKNMAGESKSSKKDSKR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5831g00001 562 CDD STKc_CDK9_like 112 396 - -
Pral5831g00001 562 MobiDBLite consensus disorder prediction 511 527 - -
Pral5831g00001 562 MobiDBLite consensus disorder prediction 430 562 - -
Pral5831g00001 562 MobiDBLite consensus disorder prediction 547 562 - -
Pral5831g00001 562 MobiDBLite consensus disorder prediction 1 81 - -
Pral5831g00001 562 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Pral5831g00001 562 FunFam probable serine/threonine-protein kinase At1g54610 195 436 - -
Pral5831g00001 562 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5831g00001 562 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5831g00001 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Pral5831g00001 562 SUPERFAMILY Protein kinase-like (PK-like) 107 401 IPR011009 -
Pral5831g00001 562 Gene3D Phosphorylase Kinase; domain 1 100 194 - -
Pral5831g00001 562 Gene3D Transferase(Phosphotransferase) domain 1 195 435 - -
Pral5831g00001 562 MobiDBLite consensus disorder prediction 47 69 - -
Pral5831g00001 562 MobiDBLite consensus disorder prediction 463 485 - -
Pral5831g00001 562 MobiDBLite consensus disorder prediction 14 35 - -
Pral5831g00001 562 PANTHER CELL DIVISION PROTEIN KINASE 110 400 - -
Pral5831g00001 562 FunFam probable serine/threonine-protein kinase At1g54610 99 194 - -
Pral5831g00001 562 Pfam Protein kinase domain 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5831g00001 562 MobiDBLite consensus disorder prediction 430 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5831g00001 Pral-Chr5831 3778 23307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5831g00001 107 434 Core Cell Cycle Gene Families AT5G10270 52.616 3.22e-119 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral5831g00001 Pkinase 2.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5831g00001 K08819 - qsa:O6P43_003509 975.311