Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5830g00021 ATGGAAGTTGATGGCTGGGAGACGGCTAACATTTCTCGGGTTTCACAGCCGTTGATCTCCTTCACGGCGGCAAAAGTGGCCAAGTGGGCAGGGAGAGAAGTACGTCTCAAGATTCTCTTCACCGCCCTCTGCCGCACTGATGTTTACTTCTGGGAAGCCAAGGGACAAACTCCGTTGTTCCCTCGTATATTTGGCCACGAAGCCGGAGGATATGAATGTGGAGAGCGTAGGGGATCGGAGGGAGTGGCTCATCTGAAACCAGGAGATCATACTCTTCCGGTGTTCACAGGCGAGTGCGGAGAGTGCCCACAATGTAAGTCGGAAGAAAGCAACATGTGCGATCTTCTGAGGATCAACAAGGACAGGGTTGTTATGATCAACGACGGCAAATCCAGATTCTCAAAGAACGGACAGCCATTATACCATTTTGTGGGAACTTCCACATTTAGCGAGTACACTGTTGTGCATGCTGGATGTGTTGCTAAAATTAACCCTGCTGTTCCTCTAGACAAAGTTTGTGTTCTCAGCTGCGGAATCTGCACAGGATTTGGTGCTACTGTGAATGTTGCAAAACCAAAACGCGGTTCATCTGCTGCCGTCTTCGGGTTTGGAGCCGTTGGCCTCGCTGCAGCTGAAGGGGCAAGAGTTTGCGGTGCATCTAGAATTATCGGGGTTGATTTAGTTTCCAGCCGTTTTGAGGGAGCCAAGAAGTTTGGAGTGAATGAGTTTATGAACCCAAAAGATCATGACAAGCCTGTACAAGAGGTAATAGCTGAAATGACCAATGGAGGTGTGGATCGTGCAATTGAGTGCACTGGGAGCATCCAGGGCATGATCTCAGCATTTGAATGCGTCCACGATGTACCTATTCAGAACTCGTCTGCTTTCTAA 891 0.4916 MEVDGWETANISRVSQPLISFTAAKVAKWAGREVRLKILFTALCRTDVYFWEAKGQTPLFPRIFGHEAGGYECGERRGSEGVAHLKPGDHTLPVFTGECGECPQCKSEESNMCDLLRINKDRVVMINDGKSRFSKNGQPLYHFVGTSTFSEYTVVHAGCVAKINPAVPLDKVCVLSCGICTGFGATVNVAKPKRGSSAAVFGFGAVGLAAAEGARVCGASRIIGVDLVSSRFEGAKKFGVNEFMNPKDHDKPVQEVIAEMTNGGVDRAIECTGSIQGMISAFECVHDVPIQNSSAF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5830g00021 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 167 286 IPR036291 -
Pral5830g00021 296 Pfam Alcohol dehydrogenase GroES-like domain 33 162 IPR013154 -
Pral5830g00021 296 Gene3D - 25 181 - -
Pral5830g00021 296 Gene3D - 182 287 - -
Pral5830g00021 296 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 195 211 IPR020082 -
Pral5830g00021 296 PANTHER ALCOHOL DEHYDROGENASE 17 287 - -
Pral5830g00021 296 FunFam S-(hydroxymethyl)glutathione dehydrogenase 182 291 - -
Pral5830g00021 296 Pfam Zinc-binding dehydrogenase 205 286 IPR013149 -
Pral5830g00021 296 SUPERFAMILY GroES-like 22 185 IPR011032 -
Pral5830g00021 296 FunFam alcohol dehydrogenase 1-like isoform X1 18 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5830g00021 Pral-Chr5830 79669 83473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5830g00021 33 251 Monolignol Biosynthesis Gene Families AT1G72680 24.091 3.46e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5830g00021 K18857 - gmx:100800668 429.483