Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5830g00013 ATGTTGGGAGCTCAAGGGGGTCCGATGCCTTCACAGTCTTCTTTCCCGTCGCTTGTGTCACCACGGACTCAGTTTAACAACATGAACATGCTAGGAAATGTGCCCAATGTATCATCCATGCTGAATCAGTCTTTCCCAAATGGGGTTCAAAATTCTGCGCTCTCTGGTCCCGGAAGTAATCAGCGAGGAGGCGTTGATGCTGGAGCTAAAACAGATCCTCTTTCCAGTGTTGGCAACGGAATGAACTTCAATAATACCTCTTCCTCATTTGTACAATCAAATATGGTGAATCCTGGTCCTTCTGGTCAAGGTCAGGGTCAACAATTTTCAAATCCTTCTGGTAACCAACTGTTGCCAGATCAACAGCATTCCCAACAGCTAGACACTCAAAATTTCCAACATAGTCAGCAGTCATTGCAACAGTTCTCAGCTCCTCTGAACTCTCAGCAACAGCAGCAGCAGCAACATTTTCAATCAATTCGAGGAGGGATAGCTGGCATTGGACCTGTTAAATTGGAGCCCCACGTAAACAATGATCAACTCGGGCAGCAGCAGCAGCAGATGCAATCACTGAGGAATCTTGCACCAGTGAAATTGGAACCTCAGCAAATGCAAACAATGAGATCTATGGCACCAGTGAAGATGGAGCCCCAGCATTCTGACCAGTCATTATTTTTGCATCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAATACCTCCACATGTCAAGGCCAACCCCTCAGCCTACTGCTGCTCAGCTTAATCTATTGCAGCACCAGAGACTGTTGCAAATACAACAGCACCAACAACAACAACTCTTGAAGGCATTGCCTCAGCAACGGCCACAACTACAACAGCAGTTTCCACAGCAGAATATGCCTATGAGGACTCCCGGAAAGCCGGTTTATGAACCTGGAATGTGTGCTAGGCGGCTGACGCATTACATGTATCAGCAACAGCATAGACCTGAAGACAACAACATTGAGTTCTGGAGGAAATTTGTTGCTGAATATTTTGCTCCTAATGCCAAAAAGAAGTGGTGCGTTTCTATGTATGGAAGCGGCAGACATACAACTGGGGTTTTTCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGTTTTGAAGCAACTGTTGAAGTACTTCCCAGGCTCTTCAAAATAAAGTATGAAAGTGGCACTTTGGAAGAGCTGCTTTATGTAGACATGCCCCGCGAGTATCATAATTCCTCTGGCCAGATTGTTCTGGATTATGCAAAAGCGATACAAGAAAGTGTTTTTGAGCAACTCCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCCAGACCTGAAGATTTGCTCTTGGGAATTCTGTGCTCGGCGTCATGAGGAGCTTATCCCAAGAAGACTGTTAATACCTCAGGTTAGTCAGCTTGGAGCTGCTGCTCAAAAATACCAGGCTTTTACTCAGAACGCAACGCCTAATTTATCTGTTCCTGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCTCGTCAGCTAGCAAAAGCCCTAGAGGTGCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAGATATCGGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAAAAGGCATTGGACCTATGGAAAGCTTGGCCAAGTATCCTCGGAGAACTAGTAGTTCATCTGGAGTTAATAGTCAGGCTCAGCTGCCTGAAGATCAATTACAGCAGCAACAGCAACAGCAGCAACAAATGGTGGCCCAAAGTTCAAATGGTGATCAAAACTCGGTGCAACCTGCTGCTGTGCAAATAGCTTCTGGCAATGGGGTGGCTAGTGTGAATAACTGTATGAACCCAGTATCTGCATCGACTACACCAAGCACCATTGTTGGACTTCTCCACCAGAACTCTATGAATTCTAGACAACAGAATTCCATGAACAATGCCAGCAGTCCATATGGAGGTAGTTCTGTTCAGATACCATCCCCAGGTTCTTCCAGTACTGTGCCACCAGCGCAGCCAAACCCGTCGCCCTTTCAAGCGCCAACACCATCCTCATCTAGCAATCCACCACAAACTTCTCACTCATCTTTAGCAGCTGGCAATCACATGAATTCATCTAATTCACCAGCTAATGTTTCCTTGCAACAACAGCAGTCATCCCTTTCCAGTGAAGCTGACCCCAGTGATGCTCAGAGTTCAGTTCAAAAAATCTTATCAGGAATATACACCCAAAATAATGGCACTGCTGGAATGGTAGGTGTCGGCTCTTTTGGAAATGATGTCAAGAATGTGAATGGGATTATGCCAGTGAATACCAATACAGGTCTCAATGGTGGCAACTGCCTGGCTGGCAATGGGCCTGTGAATGGTAATTCAGGTGTTGGGGCTGGTGGATATGGTACAATGGGCGGCGGGCTTGGTCAATCCACCATGGTCAATGGGATCAGAGCTGCAATGGGAAATAACTCTATTATGAATGGGAGGGGAGGAATGGCAACTATTGCTCGAGACCAAGCTATGAATCATCAACAAGATTTGTCAAACCAACTACTTAGTGGACTAGGAGCAGTAAATAGTTTTAATAATCTTCAATTTGATTGGAAACCTTCCCCATGA 2667 0.4537 MLGAQGGPMPSQSSFPSLVSPRTQFNNMNMLGNVPNVSSMLNQSFPNGVQNSALSGPGSNQRGGVDAGAKTDPLSSVGNGMNFNNTSSSFVQSNMVNPGPSGQGQGQQFSNPSGNQLLPDQQHSQQLDTQNFQHSQQSLQQFSAPLNSQQQQQQQHFQSIRGGIAGIGPVKLEPHVNNDQLGQQQQQMQSLRNLAPVKLEPQQMQTMRSMAPVKMEPQHSDQSLFLHQQQQQQQQQQQQQYLHMSRPTPQPTAAQLNLLQHQRLLQIQQHQQQQLLKALPQQRPQLQQQFPQQNMPMRTPGKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRHTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAFTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSREKGIGPMESLAKYPRRTSSSSGVNSQAQLPEDQLQQQQQQQQQMVAQSSNGDQNSVQPAAVQIASGNGVASVNNCMNPVSASTTPSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPPAQPNPSPFQAPTPSSSSNPPQTSHSSLAAGNHMNSSNSPANVSLQQQQSSLSSEADPSDAQSSVQKILSGIYTQNNGTAGMVGVGSFGNDVKNVNGIMPVNTNTGLNGGNCLAGNGPVNGNSGVGAGGYGTMGGGLGQSTMVNGIRAAMGNNSIMNGRGGMATIARDQAMNHQQDLSNQLLSGLGAVNSFNNLQFDWKPSP 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5830g00013 888 MobiDBLite consensus disorder prediction 211 250 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 656 682 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 42 59 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 656 749 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 75 156 - -
Pral5830g00013 888 PANTHER LIM DOMAIN-BINDING PROTEIN 183 877 IPR029005 -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 570 615 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 1 21 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 42 156 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 7 21 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 221 250 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 569 615 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 683 701 - -
Pral5830g00013 888 MobiDBLite consensus disorder prediction 702 749 - -
Pral5830g00013 888 Pfam LIM-domain binding protein 313 567 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5830g00013 Pral-Chr5830 30529 38346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5830g00013 1 884 C2H2 Transcription Factor Family AT1G43850 61.998 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5830g00013 - - gmx:100799771 1263.44