Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5830g00011 ATGCGAAAGCCGTTTGAAGGTTGCTTATCTGACCGCGCCACTGCAACTGTGATGCTCAGAATCGAAGTAAATCCTCTGGAGCTTGTAGCTTTACGTTTTGGTGATTGTGTGAAGACCTCAACATTGAAAAAATGGTACCCCCGGGACCACCCACTCCGATTGGTGGTGCCCAGTCTGTCCCCCTCCCTATTGAGATCTAATTCTGGAATGTTGGGAGCTCAAGGGGGTCCGATGCCTTCACAGTCTTCTTTCCCGTCGCTTGTGTCACCACGGACTCAGTTTAACAACATGAACATGCTAGGAAATGTGCCCAATGTATCATCCATGCTGAATCAGTCTTTCCCAAATGGGGTTCAAAATTCTGCGCTCTCTGGTCCCGGAAGTAATCAGCGAGGAGGCGTTGATGCTGGAGCTAAAACAGATCCTCTTTCCAGTGTTGGCAACGGAATGAACTTCAATAATACCTCTTCCTCATTTGTACAATCAAATATGGTGAATCCTGGTCCTTCTGGTCAAGGTCAGGGTCAACAATTTTCAAATCCTTCTGGTAACCAACTGTTGCCAGATCAACAGCATTCCCAACAGCTAGACACTCAAAATTTCCAACATAGTCAGCAGTCATTGCAACAGTTCTCAGCTCCTCTGAACTCTCAGCAACAGCAGCAGCAGCAACATTTTCAATCAATTCGAGGAGGGATAGCTGGCATTGGACCTGTTAAATTGGAGCCCCACGTAAACAATGATCAACTCGGGCAGCAGCAGCAGCAGATGCAATCACTGAGGAATCTTGCACCAGTGAAATTGGAACCTCAGCAAATGCAAACAATGAGATCTATGGCACCAGTGAAGATGGAGCCCCAGCATTCTGACCAGTCATTATTTTTGCATCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAATACCTCCACATGTCAAGGCCAACCCCTCAGCCTACTGCTGCTCAGCTTAATCTATTGCAGCACCAGAGACTGTTGCAAATACAACAGCACCAACAACAACAACTCTTGAAGGCATTGCCTCAGCAACGGCCACAACTACAACAGCAGTTTCCACAGCAGAATATGCCTATGAGGACTCCCGGAAAGCCGGTTTATGAACCTGGAATGTGTGCTAGGCGGCTGACGCATTACATGTATCAGCAACAGCATAGACCTGAAGACAACAACATTGAGTTCTGGAGGAAATTTGTTGCTGAATATTTTGCTCCTAATGCCAAAAAGAAGTGGTGCGTTTCTATGTATGGAAGCGGCAGACATACAACTGGGGTTTTTCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGTTTTGAAGCAACTGTTGAAGTACTTCCCAGGCTCTTCAAAATAAAGTATGAAAGTGGCACTTTGGAAGAGCTGCTTTATGTAGACATGCCCCGCGAGTATCATAATTCCTCTGGCCAGATTGTTCTGGATTATGCAAAAGCGATACAAGAAAGTGTTTTTGAGCAACTCCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCCAGACCTGAAGATTTGCTCTTGGGAATTCTGTGCTCGGCGTCATGAGGAGCTTATCCCAAGAAGACTGTTAATACCTCAGGTTAGTCAGCTTGGAGCTGCTGCTCAAAAATACCAGGCTTTTACTCAGAACGCAACGCCTAATTTATCTGTTCCTGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCTCGTCAGCTAGCAAAAGCCCTAGAGGTGCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAGATATCGGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAAAAGGCATTGGACCTATGGAAAGCTTGGCCAAGTATCCTCGGAGAACTAGTAGTTCATCTGGAGTTAATAGTCAGGCTCAGCTGCCTGAAGATCAATTACAGCAGCAACAGCAACAGCAGCAACAAATGGTGGCCCAAAGTTCAAATGGTGATCAAAACTCGGTGCAACCTGCTGCTGTGCAAATAGCTTCTGGCAATGGGGTGGCTAGTGTGAATAACTGTATGAACCCAGTATCTGCATCGACTACACCAAGCACCATTGTTGGACTTCTCCACCAGAACTCTATGAATTCTAGACAACAGAATTCCATGAACAATGCCAGCAGTCCATATGGAGGTAGTTCTGTTCAGATACCATCCCCAGGTTCTTCCAGTACTGTGCCACCAGCGCAGCCAAACCCGTCGCCCTTTCAAGCGCCAACACCATCCTCATCTAGCAATCCACCACAAACTTCTCACTCATCTTTAGCAGCTGGCAATCACATGAATTCATCTAATTCACCAGCTAATGTTTCCTTGCAACAACAGCAGTCATCCCTTTCCAGTGAAGCTGACCCCAGTGATGCTCAGAGTTCAGTTCAAAAAATCTTATCAGGAATATACACCCAAAATAATGGCACTGCTGGAATGGTAGGTGTCGGCTCTTTTGGAAATGATGTCAAGAATGTGAATGGGATTATGCCAGTGAATACCAATACAGGTCTCAATGGTGGCAACTGCCTGGCTGGCAATGGGCCTGTGAATGGTAATTCAGGTGTTGGGGCTGGTGGATATGGTACAATGGGCGGCGGGCTTGGTCAATCCACCATGGTCAATGGGATCAGAGCTGCAATGGGAAATAACTCTATTATGAATGGGAGGGGAGGAATGGCAACTATTGCTCGAGACCAAGCTATGAATCATCAACAAGATTTGTCAAACCAACTACTTAGTGGACTAGGAGCAGTAAATAGTTTTAATAATCTTCAATTTGATTGGAAACCTTCCCCATGA 2874 0.4565 MRKPFEGCLSDRATATVMLRIEVNPLELVALRFGDCVKTSTLKKWYPRDHPLRLVVPSLSPSLLRSNSGMLGAQGGPMPSQSSFPSLVSPRTQFNNMNMLGNVPNVSSMLNQSFPNGVQNSALSGPGSNQRGGVDAGAKTDPLSSVGNGMNFNNTSSSFVQSNMVNPGPSGQGQGQQFSNPSGNQLLPDQQHSQQLDTQNFQHSQQSLQQFSAPLNSQQQQQQQHFQSIRGGIAGIGPVKLEPHVNNDQLGQQQQQMQSLRNLAPVKLEPQQMQTMRSMAPVKMEPQHSDQSLFLHQQQQQQQQQQQQQYLHMSRPTPQPTAAQLNLLQHQRLLQIQQHQQQQLLKALPQQRPQLQQQFPQQNMPMRTPGKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRHTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAFTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSREKGIGPMESLAKYPRRTSSSSGVNSQAQLPEDQLQQQQQQQQQMVAQSSNGDQNSVQPAAVQIASGNGVASVNNCMNPVSASTTPSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPPAQPNPSPFQAPTPSSSSNPPQTSHSSLAAGNHMNSSNSPANVSLQQQQSSLSSEADPSDAQSSVQKILSGIYTQNNGTAGMVGVGSFGNDVKNVNGIMPVNTNTGLNGGNCLAGNGPVNGNSGVGAGGYGTMGGGLGQSTMVNGIRAAMGNNSIMNGRGGMATIARDQAMNHQQDLSNQLLSGLGAVNSFNNLQFDWKPSP 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5830g00011 957 MobiDBLite consensus disorder prediction 639 684 - -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 771 818 - -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 752 770 - -
Pral5830g00011 957 PANTHER LIM DOMAIN-BINDING PROTEIN 251 946 IPR029005 -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 725 751 - -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 111 224 - -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 111 128 - -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 280 318 - -
Pral5830g00011 957 Pfam LIM-domain binding protein 382 636 IPR029005 -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 144 224 - -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 638 684 - -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 725 818 - -
Pral5830g00011 957 MobiDBLite consensus disorder prediction 290 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5830g00011 Pral-Chr5830 30529 38348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5830g00011 70 953 C2H2 Transcription Factor Family AT1G43850 61.998 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5830g00011 - - gmx:100799771 1291.56