Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5828g00029 ATGGAAATGATGGGCCTGATTCTCTTATTAGTAGCCATAGCAGCAACAGCAGGTGAAGCTCAGTTGTCCCTGTATCGTGATTGTCCCCACAAATGTGGAGGTGTGGATATTCCATATCCATTTGGTGTTGGAGATCACTGCTCTCTGAATAAATTCTTCAATCTCACGTGTAATGGCTCCAAATTATATTACCGCAGCTCAGACATTGTGGTCTCGAACATATCCCTCGATGGTCAAATGGACATCCCTTTTTATGTCTCCCCGAATTGTTACAATCAAGCAGGAGGAAAGATTCGTGACAAATCTTTTTCTGCCTCTCTCGAGATTTCTGCTTTCCCCGTTTCTAGCTCCGCAAACAAGTTCGTGAGCGTGGGTTGTGACACTTACGGCTACTTGAATAGTTTTCTGGGCGAACAGAATTATTCCACTGGCTGCCTATCGCGATGTAACGGACAACTACAACCAACAGCAGAGAATACCGGTGAAACTTGTTCAGGAATTGGGTGTTGCCAAATCGATATTCCTCCTCGAATGAAGAATATCACTATTGAATCATATAGCTTCGACAAGCATCAAAACGTGTGGGCCTTCAACAACTGCAGCTATGCTTTTGTTGCCAAAAAAGGCTCTTTTAATTTCTCTCCTCGTTATCTCGAGCATCTCCCCTTTGAGGAGCTCCCGCTCGTGTTAGATTGGTTCATTGCAAATGCAAGTGCTTGCCAAGAAGCTACCGCCCTGAGCACACCGAATTCTGTATGCAACACCAGAGCCACCTGTCAGAACTACACCACTGAATTCGGTTACAGATGCCTCTGCAAGCGCGGGTATCAAGGAAATCCTTACCATCCGGATGGATGTCAGGATGTTAATGAGTGTGACAAACCCAATGATTGTGATATCAAAGGGCATGCGCAGTGCAACAATTTCAATGGCAGCCACAGCTGTTCTTGTCCCCCTGGTTATACAGGCGATGGCTACCTTAATGGAACCCGCTGCACTCTGGACGCTACTCTTCACTCTAATCCTAATTTGCTCTCTCTCATAATAGCACTAGGCGTTTGTGCAACCTTGTTAGTTGGCTTCACCCTTGTTTCCATGTTATGCTGGGCACACAAGCAAAGAACTCAGAAGCTAATTAGAGAAAGAAATTTCGAGCGAAACGGAGGAAATGTGCTGTTACAAAGACTTTCACAACAACAAGGATATGCTGACAGAACCAAAATATTTAACCAGGTTGAGCTTCAGAATGCCACAGACAACTTTGATGAAGATAGAATCCTTGGTCGTGGGGGACAGGGCACAGTTTACAAGGGTATATTAGCAGACAACACACCGGTTGCCATTAAGAAGTCTAGAGTAGGAGGGGATCCCAGACAAATTAAGGATTTTATCAATGAAGTGGTTGTTCTTTCCCAAATCAATCATCGGAATGTGGTCAAACTTTTGGGGTGTTGTCTTGAAACCGAAGTTCCTTTGTTAGTCTATGAGTTTGTGGATAATGGCACTCTTCTTGACCATATTAACCCATCAAAGAATGAATTCTTTATTTCATGGGAAACTCGATTAAGAATAGCTGCAGAAACTGCTGAGGCCATTTCATATTTACATTCTGCGGCCTCCATTCCAATTATTCATCGGGATATAAAATCTACCAACATATTACTAGACCACAATCATAGAGCAAAGGTGTCTGACTTCGGAGCTTCAAGACTTGTTCCTCTTGATGAGACTCAAGCTGCCACAGTGGTACAAGGGACGCTTGGATACCTGGATCCAGAGTATCTTCTCACAGGTCAGTTAAATGAGAAGAGTGATGTTTATAGTTTTGGGGTTGTGCTTGTAGAGCTACTTACTGGCAATAAAGCTGTTGAGTTCAATAGACCTGAACAACCAAATTTGGCTATGTCCTTTGTGTCTTCAATAAAAGAAGACCGTTTATGGGAAATTCTTGATAGGCAGTTGTTAGATCAGAAGAAGAATGCTGCACAGTTGAAGGAAGTTGCTTTTCTGGCAAGAAGGTGTATTAGAATTAATGGAGAGGAAAGACCAACTATGAAGGAAGTAGCAATGGAATTAGAGGGTTTGATTGCAATGGAAAGGCATCCTTGGATGAAGGGTAGGGATGCCATCTCTGAAGAAACTGAATACTTACTTGTTCATGTGCCTGATGAATATGGGGCCGCCAGTACTAGCAATTCATCTGGATATGATACCATGCAAAAGCAGATGGCGTTTGAGATTGAAGATGGGCGTTGA 2256 0.4326 MEMMGLILLLVAIAATAGEAQLSLYRDCPHKCGGVDIPYPFGVGDHCSLNKFFNLTCNGSKLYYRSSDIVVSNISLDGQMDIPFYVSPNCYNQAGGKIRDKSFSASLEISAFPVSSSANKFVSVGCDTYGYLNSFLGEQNYSTGCLSRCNGQLQPTAENTGETCSGIGCCQIDIPPRMKNITIESYSFDKHQNVWAFNNCSYAFVAKKGSFNFSPRYLEHLPFEELPLVLDWFIANASACQEATALSTPNSVCNTRATCQNYTTEFGYRCLCKRGYQGNPYHPDGCQDVNECDKPNDCDIKGHAQCNNFNGSHSCSCPPGYTGDGYLNGTRCTLDATLHSNPNLLSLIIALGVCATLLVGFTLVSMLCWAHKQRTQKLIRERNFERNGGNVLLQRLSQQQGYADRTKIFNQVELQNATDNFDEDRILGRGGQGTVYKGILADNTPVAIKKSRVGGDPRQIKDFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVDNGTLLDHINPSKNEFFISWETRLRIAAETAEAISYLHSAASIPIIHRDIKSTNILLDHNHRAKVSDFGASRLVPLDETQAATVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLVELLTGNKAVEFNRPEQPNLAMSFVSSIKEDRLWEILDRQLLDQKKNAAQLKEVAFLARRCIRINGEERPTMKEVAMELEGLIAMERHPWMKGRDAISEETEYLLVHVPDEYGAASTSNSSGYDTMQKQMAFEIEDGR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5828g00029 751 Gene3D Transferase(Phosphotransferase) domain 1 498 712 - -
Pral5828g00029 751 ProSiteProfiles Protein kinase domain profile. 421 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5828g00029 751 SUPERFAMILY Protein kinase-like (PK-like) 403 692 IPR011009 -
Pral5828g00029 751 SMART egf_5 291 333 IPR000742 -
Pral5828g00029 751 SMART egf_5 239 287 IPR000742 -
Pral5828g00029 751 CDD EGF_CA 288 324 - -
Pral5828g00029 751 Gene3D Laminin 291 334 - -
Pral5828g00029 751 SMART serkin_6 421 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5828g00029 751 Pfam Protein kinase domain 422 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5828g00029 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 695 IPR045274 GO:0007166
Pral5828g00029 751 Pfam Wall-associated receptor kinase galacturonan-binding 28 79 IPR025287 GO:0030247
Pral5828g00029 751 CDD STKc_IRAK 427 695 - -
Pral5828g00029 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Pral5828g00029 751 Gene3D Laminin 238 290 - -
Pral5828g00029 751 Pfam Calcium-binding EGF domain 288 325 IPR001881 GO:0005509
Pral5828g00029 751 SUPERFAMILY EGF/Laminin 287 326 - -
Pral5828g00029 751 FunFam Wall-associated receptor kinase 2 498 715 - -
Pral5828g00029 751 ProSiteProfiles EGF-like domain profile. 288 333 IPR000742 -
Pral5828g00029 751 FunFam Wall-associated receptor kinase 2 391 497 - -
Pral5828g00029 751 FunFam Fibrillin 2 283 328 - -
Pral5828g00029 751 Gene3D Phosphorylase Kinase; domain 1 393 497 - -
Pral5828g00029 751 SMART egfca_6 288 333 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5828g00029 Pral-Chr5828 164752 168165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5828g00029 8 751 Receptor kinase-like Gene Family AT1G21230 45.263 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral5828g00029 Pkinase 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5828g00029 - - pcin:129293718 884.019