Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5827g00002 ATGGTTCATCAGAACACTCAGAACGATTCAAGAAGAAAGAAGGTGCTTGTTGATGAGCAATTTCCTCTGCTAGTGAATGAGAAAGATGTGGGTTCTCAGGGGGCATCTTTTAGTGGGTCAGTGTTCAATTTATCTACCACCATTATTGGAGCTGGAATTATGGCCTTACCTGCTGCCATGAAAGTTCTGGGATTGGGTTTGGGAATTATTGCCATAGTCTTTCTTGCGTTGCTTACGGAGACTTCCTTAGAGATTCTGATAAGGTTTAGCAGAGTAGGAAAGGCTGAGACCTATGGGGAAGTAATGCGTTTTGCCTTTGGAAGTGTTGGAAGATGGGCTTTTCAGTTATGCGTTCTGCTTAACAATTTTGGAATTCTCGTCGTCTACGTGATCATAATTGGTGATGTGCTATCTGGAACATCTTCAAGTGGAACTCATCATGCTGGTGTATTGGAAGGATGGTTTGGCGAATACTGGTGGACTGGGCGTACTTTTATTCTCCTTGTGGCAACCCTATTTGTATTTACTCCTTTGGCATTCTTCAAGCGGATAGATTCGTTGAGATATACTTCCGCTTTAGCGGTGGCACTGGCAATTGTATTTATAGTCATAACGGCGGGGATAACATTTATAAAATTGTTTAATGGTAGCATTACCAGACCCAGGTTGCTCCCTAATGTTACCGATTTTACGTCTGCCTGGAAGCTCTTTACAGCAACCCCTGTTCTTGTGACAGCGTTTGTCTGTCATTACAATGTGCACACAATAGACAATGAGCTAGCAGACTCTTCCTCGATACATAAAGTTGTACGTGCTTCTCTGGTTCTATGTTCCAGTGTCTATATATTTACGGCCTTATTTGGGTTTCTTTTGTTTGGTGAATCAACCCTTGATGATGTGCTGGCCAACTTTGATACTGACCTTGGCATCCCTTACAGCAGCCTGCTCAATGACATCGTTCGCCTCAGCTATGCCCTCCACCTTATGCTTGTTTTCCCAGTCATCTTCTTCTCACTGCGCTTCAATTTTGATGATTTACTTTTCCCTTCAGCTAGGTCAATGGATTTAGATAATGTTAGGTTTGTGTTGATCACAACTGGACTCATCTCTTTTATATATGTGGCGGCAAATTTTATACCTAGCATTTGGGATGCTTTCCAATTCACTGGAGCAACTGCTACTGTTTGCCTAGGGTTCATTTTTCCTGCTGCAATTGCTCTAAGGGATCCTAATGGTATTGCAACAACGAAAGATAAGGTTTTATCTGTTGTCATGATTGTGCTGGCTGTGTCCTCAAATGTGATGGCCATATACAGTAATGCCAATGCTATCTTTAGTAAACATGTTGATCCTCATGAATGA 1362 0.4207 MVHQNTQNDSRRKKVLVDEQFPLLVNEKDVGSQGASFSGSVFNLSTTIIGAGIMALPAAMKVLGLGLGIIAIVFLALLTETSLEILIRFSRVGKAETYGEVMRFAFGSVGRWAFQLCVLLNNFGILVVYVIIIGDVLSGTSSSGTHHAGVLEGWFGEYWWTGRTFILLVATLFVFTPLAFFKRIDSLRYTSALAVALAIVFIVITAGITFIKLFNGSITRPRLLPNVTDFTSAWKLFTATPVLVTAFVCHYNVHTIDNELADSSSIHKVVRASLVLCSSVYIFTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRLSYALHLMLVFPVIFFSLRFNFDDLLFPSARSMDLDNVRFVLITTGLISFIYVAANFIPSIWDAFQFTGATATVCLGFIFPAAIALRDPNGIATTKDKVLSVVMIVLAVSSNVMAIYSNANAIFSKHVDPHE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5827g00002 453 Pfam Transmembrane amino acid transporter protein 35 438 IPR013057 -
Pral5827g00002 453 PANTHER AMINO ACID TRANSPORTER 28 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5827g00002 Pral-Chr5827 19878 23008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5827g00002 33 453 Amino Acid or Auxin Permease AAAP Family AT3G30390 66.508 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5827g00002 K14207 - gmx:100778699 679.863