Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5825g00002 ATGGCACATACTGCCGGAGGAGAATCTTCTTCCAGCTCTGATCCTCGTAATTCAACTCCTAACTGGAAATATGATGTGTTCTTGAGTTTTACAGGGAAAGACACTCGCTTGAAGTTTCTGGATCACTTAGATAAAGCTTTCGAAAGAAGTGGCATCAAAACATTTAAGGATGATAAAGATCTTGAGAGAGGGAAAGTCATAAAAGAAGATCTCTTTCAAGCAATCGAGGATTCTCTCTGTGCAGTTATTGTTATCTCTGAAAATTATGCAAAATCTACGTGGTGTTTAGAGGAACTTCAAAAGATCCTTGAAGCTTCAAAAATATTGGATCGACGGGTTTTCCCCATATTCTATGATGTTGATCCAACCGATGTAAGACACCAACGAAAACGCTTTCTGGAAGCCATGGATGAACATGAAAACAGATTCAGGGAGGACAATGTGAAAGTGCAGACTTGGAGAAGTGCATTGTGTGAAATTGCCAACTTGTCTGGTTGGGACACCAGGGGCAGGCGTGAAGCAGATCTTATAGAAGAAATAGTCATAAATGTATGGACTTGCATAATTCCTAAATTACCATCTTATGTTGACAATCTGGTTGGGATTGAGTCAAGGGCAGGTGATATGATGTCTCGCTTGGAGATTGGGGTGGATGACAGACATTTTGTAGGGATATGGGGTATGGGCGGTGTGGGTAAAACAACTCTTGCTAGAGTTGTTTTTGAAAAACTATCCCACAAGTTTGAAGTGTGTTGCTTTCTTGATAATGTTAGAGAAACATTCGAGAAAGAAGGCAAGGTCTCTTTGCAACAAAAGCTTCTTTTTCATCTCGAAAAGAAAGCTGTGAATATTCCTAATGATTACGAAGGAATGAAGATGATAAGAAAGCGTCTCCACAATAAAAAGGTTCTTCTAGTCATTGATGATGTAGATCATGAGAGACAATTTAAAAATTTGGCTGAAAGTCCAGATTGGTGGTCTTCCTTTGGCACTCGAAGTTTTGGGTTCTTTTCTTCACGAAAGAAAAAAAGCAGAGTGGAAAGATACTTTAGATGGATTGAAGAATAG 1068 0.3923 MAHTAGGESSSSSDPRNSTPNWKYDVFLSFTGKDTRLKFLDHLDKAFERSGIKTFKDDKDLERGKVIKEDLFQAIEDSLCAVIVISENYAKSTWCLEELQKILEASKILDRRVFPIFYDVDPTDVRHQRKRFLEAMDEHENRFREDNVKVQTWRSALCEIANLSGWDTRGRREADLIEEIVINVWTCIIPKLPSYVDNLVGIESRAGDMMSRLEIGVDDRHFVGIWGMGGVGKTTLARVVFEKLSHKFEVCCFLDNVRETFEKEGKVSLQQKLLFHLEKKAVNIPNDYEGMKMIRKRLHNKKVLLVIDDVDHERQFKNLAESPDWWSSFGTRSFGFFSSRKKKSRVERYFRWIEE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5825g00002 355 Gene3D - 187 345 IPR027417 -
Pral5825g00002 355 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Pral5825g00002 355 SMART till_3 23 163 IPR000157 GO:0007165
Pral5825g00002 355 Gene3D - 16 186 IPR035897 -
Pral5825g00002 355 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 166 IPR035897 -
Pral5825g00002 355 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 333 IPR044974 GO:0006952
Pral5825g00002 355 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 189 - -
Pral5825g00002 355 Pfam TIR domain 23 185 IPR000157 GO:0007165
Pral5825g00002 355 PRINTS Disease resistance protein signature 222 237 - -
Pral5825g00002 355 PRINTS Disease resistance protein signature 297 311 - -
Pral5825g00002 355 Pfam NB-ARC domain 219 318 IPR002182 GO:0043531
Pral5825g00002 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 342 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5825g00002 Pral-Chr5825 60263 63875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5825g00002 24 343 WRKY Transcription Factor Family AT4G12020 26.994 1.90e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5825g00002 - - pcin:129303509 415.231