Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5822g00007 ATGAAAACACCGACGACGACGACGACGACGACGGAGGACAAATCGGAGTTCTCACCTGTGTTTCGATCGGGAAGCTGTTCTGAGAAAGGACCCAAGCAGTACATGGAGGATGAGTTCATCGCTGTCGATACTCTCCATGAAAACCTTCCTCCTGCAACTCATCACCTTCCTTCTCCTGGCGCTTTTTACGGGATATTTGATGGGCACGGAGGCACGGATGCAGCATTATTTACGAGAAAGAACATCCTCAAGTTTATCACCACAGACTCGCACTTCCCTTGCAGCATCCAAAAGGCGATCAAGAGTGCCTTTGTGAAGGTTGATCACGCCCTAGCCGATGCCATTTCTCTCGATAGATCTTCAGGCACCACTGCTTTAATAGCTTTCATGATGGGAAGAAGTATGCTAATAGCCAATATAGGCGATTCTAGAGCTGTGTTGGGAAAACGAGGGAGAGCCGTTGAACTGTCCAAGGATCACAAGCCAAACTGCACGTCGGAGAGACTAAGAATAGAGAAACTGGGCGGCGTAATCTACGACGGATATCTCAACGGCCAACTGTCGGTGGCGAGAGCACTAGGAGACTGGCACATCAAAGGCTCGAAAGGATCAAAGAGCCCATTAATCTCAGAGCCAGAGCTTGAAGAGGTGGTTTTAACACAAGAGGACGAGTACTTAATAATGGGTTGTGATGGATTATGGGACGTGATGAGCAGCCAGTGTGCTGTTACGACGGTGAGGAAGGAACTGATGCAGCACAATGATCCGGCGAGGTGTGCGAAAGCACTGGTAACTGAAGCGTTACAACGTAATACATGCGACAATCTAACTGTTGTTGTTGTCTGTTTCTCACAACATCCTCCTCCTAAGCTTCAGGTTCCTGTGCTGCACAAGAGGAGGAGCATTTCGGCTGAAGGCTTGGATCTTCTTAAGGGCGTACTCTCTTGA 948 0.4884 MKTPTTTTTTTEDKSEFSPVFRSGSCSEKGPKQYMEDEFIAVDTLHENLPPATHHLPSPGAFYGIFDGHGGTDAALFTRKNILKFITTDSHFPCSIQKAIKSAFVKVDHALADAISLDRSSGTTALIAFMMGRSMLIANIGDSRAVLGKRGRAVELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLISEPELEEVVLTQEDEYLIMGCDGLWDVMSSQCAVTTVRKELMQHNDPARCAKALVTEALQRNTCDNLTVVVVCFSQHPPPKLQVPVLHKRRSISAEGLDLLKGVLS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5822g00007 315 SUPERFAMILY PP2C-like 15 285 IPR036457 -
Pral5822g00007 315 CDD PP2Cc 21 283 IPR001932 -
Pral5822g00007 315 PANTHER PROTEIN PHOSPHATASE 2C 10 281 IPR015655 GO:0004722|GO:0006470
Pral5822g00007 315 MobiDBLite consensus disorder prediction 1 22 - -
Pral5822g00007 315 Gene3D - 1 287 IPR036457 -
Pral5822g00007 315 FunFam Probable protein phosphatase 2C 22 6 286 - -
Pral5822g00007 315 ProSiteProfiles PPM-type phosphatase domain profile. 22 283 IPR001932 -
Pral5822g00007 315 Pfam Protein phosphatase 2C 23 275 IPR001932 -
Pral5822g00007 315 MobiDBLite consensus disorder prediction 1 30 - -
Pral5822g00007 315 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Pral5822g00007 315 SMART PP2C_4 12 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5822g00007 Pral-Chr5822 45200 46543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5822g00007 15 315 PP2C-type Phosphatase Gene Family AT3G51470 77.076 5.60e-175 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5822g00007 K14803 - cave:132171122 496.508