Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5822g00004 ATGGAACTAAACTCAATATTTCATTCCAGGACACCAAATTCTCCACTGGTTTTCTTGGCATCGTTGACTGTAGCATTATTATTGATGGAGAATGATACAGTGGCCATAATTGGCCCTCAATACTCAGTGATGGCTCACGTGATTTCACACATAGCCAATGAACTGCAAGTACCATTACTATCATTTGCGGCAACAGACCCTACCTTGACTTCTCTTCAGTTCCCATATTTTGTTAGGACAACACATAGTGATCAATTTCAAATGGCTGCTGTGGCAGATATTGTTGACTATTATCAATGGAGAGATGTGATAGCAATCTACATCGATGATGATCATGGAAGAAATGGGATAGTTGCATTAGAAGATAAGCTAGCTGAGAAACGTTGTAAGATCTCATATAAAGCCCCTCTTACACCAAATAATATCGACAAGGAAGAAATAAACAATGCACTAGTCAAGGTCATTATAAGGGAGTCCAGGGTTATAGTCCTACACATATACCCTAGTTTTGGTGTAGATGTACTTCATGTGGCTGAGTCACTAGGCATGTTGGGAAGTGGGTATGTCTGGTTGGCCACTGATTGGCTTTCCACAGTCCTAGATACTGATCCAACTAGGTCGTCTTCATACATGAATGACCTCCAAGGTGTTATAACCTTGAGAATGTACACACCTGATTCTGGAACGAAACAGAATTTATCTTCCAGGTGGAGTAATTTAGTACAGAAGAAAGCTCCTGATCAAAGTCCTTTCATGTGGAACACTTATGGCCTTTATGCCTATGACACTGTTTGGGTCCTTGCACATGCCCTTGATTCATTTTTCAATAGGGGAGGGACTTTATCATTTTCAAATGATTCAAGTCTAAACAAACTAACAGGGGGTAGACTGGACTTAAATTCTATAAGGGTCTTTGCCAACGGGAGGTTATTGCTGGAAGAAACTATGAAGGTGAATAGAACTGGTTTAACAGGTCAAATGATGTTTAGTCCAGATGGCGAGCTTATGAATCCTTCATACGAAATCATTAATGTGATTGGTACTGGGGTTAGGAGGATTGGATTTTGGTCCAATTCCTCTGGTTTACACACTGGACAAGCACCTAGTCATTCAAACTCAAGTAAAGGGCTTTATGGCGTGATATGGCCTGGGCAAACAACAACAACACCTCGTGGTTGGGTTTTTCCCAACAATGGTAGGCGTTTAATTATTGGGGTGCCTCTCAGGATTAGTTACCATGAATTTGTGTCAAGAATTGAAGGATTTGAAATATTTGGAGGTTATTGCATAGATGTCTTCAAAGCTGCACTGGACTTATTGCCTTATCCAGTTCCATACAATTTTGTCCCATTTGGAGATGGTAAAAGTAACCCATTAAACTCAGAACTTCTGAAAAAAATCACAACTGGTGAGTTTGATGCTGTGGTAGGTGACATTACTATTACCACAAACAGAACAAAGATAGTGGATTTCACACAACCATATATTGAGTCTGGGCTAGTTGTTGTGGCTCCTATTAGAAAGTCAAACTCTAACGCTTGGGCTTTCCTAAGACCATTTACTCCAATGATGTGGTTTGTGACTGGAATGTCTTTCTTTGTTGTGGGAGCAGTTGTGTGGGTTTTAGAACGGCGAGTAAATGACGATTTTCGAGGTCCCGCTAGAAGACAGTTTGTGACCATTATATGGTTTAGTTTTTCAACCCTGTTTTTTGCACATAGAGAGAGAACTTTGAGCACCCTGGGTCGCTTAGTGCTGATAATATGGCTATTTGTAGTCCTAATACTGAACTCCAGCTACATAGCAAGCCTGACCTCTATTCTCACAGTGGAACAGCTCTCTTCCCCAGTGAAAGGAATTGAGAGCTTAGTAACCAGCAAAGACCTCATTGGCTATCTACGAGGCTCATTTGCAGAGAACTACCTCACTGAAGAACTCAACATCATGAAATCCAGACTTGTGCCACTGGATTCTCCATTAGAATATGAGAAAGCCTTGAAGGATGGACCTGCCAATGGTGGTGTTGCAGCAATCATTGATGAACGTGCTTACATGGAGCTCTTTCTTTCAACTAGATGTGAATTTGGAATCGTTGGTCAAGAGTTCACCAAAATGGGTTGGGGTTTTGCTTTTCCCAGAGATTCTCCTTTGGCAATAGACATGTCAACAGCAATCTTAAAACTATCAGAGAACGGTGATCTTCAAAGAATACATGACAAATGGCTTTCAAGAAGTGCATGCAGCTCAGAAGGCTCAAAGCAAGGCATAGACAGATTGCAGCTAAGGAGCTTTTGGGGTCTCTTTCTTCTATGTGGGATTGCCTGCTTCATAGCTCTGCTTTGTTATGTCATTCGCATGGCCTACCGTTTTAGCCGCCACTCTGACTGCGACCTCGCCGGCTTGTCGCACTCAGCTCGAATCCAGTCATTTATTTCCTTTGTCAATGAAAAAGAAGAGGAAGGAAAGAATTGCAGCAAGCCAAGGAGAAGCAGAAAAGTAGCGCATGAAGATGGGTCAATGGATGGCTCCAATATTAACGGTGTTCATTATGAAAATGATCCTTCCCAGTGTTAA 2574 0.4161 MELNSIFHSRTPNSPLVFLASLTVALLLMENDTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLTSLQFPYFVRTTHSDQFQMAAVADIVDYYQWRDVIAIYIDDDHGRNGIVALEDKLAEKRCKISYKAPLTPNNIDKEEINNALVKVIIRESRVIVLHIYPSFGVDVLHVAESLGMLGSGYVWLATDWLSTVLDTDPTRSSSYMNDLQGVITLRMYTPDSGTKQNLSSRWSNLVQKKAPDQSPFMWNTYGLYAYDTVWVLAHALDSFFNRGGTLSFSNDSSLNKLTGGRLDLNSIRVFANGRLLLEETMKVNRTGLTGQMMFSPDGELMNPSYEIINVIGTGVRRIGFWSNSSGLHTGQAPSHSNSSKGLYGVIWPGQTTTTPRGWVFPNNGRRLIIGVPLRISYHEFVSRIEGFEIFGGYCIDVFKAALDLLPYPVPYNFVPFGDGKSNPLNSELLKKITTGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKSNSNAWAFLRPFTPMMWFVTGMSFFVVGAVVWVLERRVNDDFRGPARRQFVTIIWFSFSTLFFAHRERTLSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTSKDLIGYLRGSFAENYLTEELNIMKSRLVPLDSPLEYEKALKDGPANGGVAAIIDERAYMELFLSTRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGSKQGIDRLQLRSFWGLFLLCGIACFIALLCYVIRMAYRFSRHSDCDLAGLSHSARIQSFISFVNEKEEEGKNCSKPRRSRKVAHEDGSMDGSNINGVHYENDPSQC 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5822g00004 857 FunFam Glutamate receptor 639 746 - -
Pral5822g00004 857 SUPERFAMILY Periplasmic binding protein-like II 378 744 - -
Pral5822g00004 857 Gene3D - 407 512 - -
Pral5822g00004 857 PIRSF IGluLR_plant 6 854 IPR017103 -
Pral5822g00004 857 MobiDBLite consensus disorder prediction 821 857 - -
Pral5822g00004 857 Gene3D - 25 337 - -
Pral5822g00004 857 Gene3D - 705 741 - -
Pral5822g00004 857 Pfam Bacterial extracellular solute-binding proteins, family 3 460 743 IPR001638 -
Pral5822g00004 857 Gene3D - 676 704 - -
Pral5822g00004 857 SUPERFAMILY Periplasmic binding protein-like I 23 394 IPR028082 -
Pral5822g00004 857 Gene3D - 83 362 - -
Pral5822g00004 857 CDD GluR_Plant 400 742 - -
Pral5822g00004 857 Gene3D - 513 650 - -
Pral5822g00004 857 PRINTS Metabotropic glutamate GPCR signature 68 87 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5822g00004 857 PRINTS Metabotropic glutamate GPCR signature 36 62 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5822g00004 857 PRINTS Metabotropic glutamate GPCR signature 87 103 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5822g00004 857 PRINTS Metabotropic glutamate GPCR signature 103 120 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral5822g00004 857 FunFam Glutamate receptor 83 243 - -
Pral5822g00004 857 FunFam Glutamate receptor 513 643 - -
Pral5822g00004 857 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 21 817 IPR015683 -
Pral5822g00004 857 Pfam Receptor family ligand binding region 20 347 IPR001828 -
Pral5822g00004 857 MobiDBLite consensus disorder prediction 821 838 - -
Pral5822g00004 857 FunFam Glutamate receptor 397 513 - -
Pral5822g00004 857 Pfam Ligand-gated ion channel 744 775 IPR001320 GO:0015276|GO:0016020
Pral5822g00004 857 SMART GluR_14 401 744 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5822g00004 Pral-Chr5822 20073 23711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5822g00004 21 844 Ion Channels AT3G51480 57.572 0.0 989
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5822g00004 K05387 - gmx:100790502 1328.15