Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5820g00002 | ATGAGGAAACCTTTCTGTGAGAAGGTGGGTTTGAGCAGAGGAGCTTGGTCCAAACAAGAAGATCAGAAACTCATTGATTACATCAACAAATATGGCGAGGGTTCCTGGCGTACCCTCCCTCAAGCTGCTGGATTACTTCGCTGCGGCAAAAGTTGTAGGCTGAGGTGGATGAACTATCTGAGGCCAGACATCAAAAGAGGCAACTTTGCCGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCCCTTCTAGGCAACCGGTGGTCACTGATAGCTGGAAGATTACCAGGGAGGACAAATAATGAGGTGAAGAACTATTGGAACTCTCATCTGAGAAAAAAGCTCATAAATGAAGGAATTGATCCGAAGAATCGTCGGTTAACTCGAAATCCGCCATTAATGCCTGGAAGCTCAGCCTCATCATCATATAATAATAGTGCCAAGAATAATAATGATGAGCCAATTACAACAAAACCTTATTATGTCTCTGATAACAAATCTGATCGCGATCAAGTCTCAGATGCAGCAAGTGGTTTAGAGGAGGAAGAATCATCTTGCATACCTGATTTGAACCTCGACCTCACTATGAGGATTGGAATTATTTCTTCTTCTTCTTCTTTACCTCCCCCAGATCCAAAGCCAGTTCCAGAATATTCTAGAACATCAACTGAACTTCTTCTGTTTAGGTGA | 690 | 0.4261 | MRKPFCEKVGLSRGAWSKQEDQKLIDYINKYGEGSWRTLPQAAGLLRCGKSCRLRWMNYLRPDIKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTNNEVKNYWNSHLRKKLINEGIDPKNRRLTRNPPLMPGSSASSSYNNSAKNNNDEPITTKPYYVSDNKSDRDQVSDAASGLEEEESSCIPDLNLDLTMRIGIISSSSSLPPPDPKPVPEYSRTSTELLLFR | 229 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5820g00002 | 229 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 61 | 115 | IPR017930 | - | |
Pral5820g00002 | 229 | Gene3D | - | 68 | 132 | - | - | |
Pral5820g00002 | 229 | MobiDBLite | consensus disorder prediction | 202 | 223 | - | - | |
Pral5820g00002 | 229 | SUPERFAMILY | Homeodomain-like | 10 | 107 | IPR009057 | - | |
Pral5820g00002 | 229 | CDD | SANT | 68 | 111 | IPR001005 | - | |
Pral5820g00002 | 229 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 1 | 165 | - | - | |
Pral5820g00002 | 229 | MobiDBLite | consensus disorder prediction | 118 | 184 | - | - | |
Pral5820g00002 | 229 | CDD | SANT | 15 | 60 | IPR001005 | - | |
Pral5820g00002 | 229 | FunFam | MYB transcription factor | 67 | 128 | - | - | |
Pral5820g00002 | 229 | Gene3D | - | 13 | 65 | - | - | |
Pral5820g00002 | 229 | ProSiteProfiles | Myb-like domain profile. | 61 | 111 | IPR001005 | - | |
Pral5820g00002 | 229 | ProSiteProfiles | Myb-like domain profile. | 8 | 60 | IPR001005 | - | |
Pral5820g00002 | 229 | FunFam | MYB-related transcription factor | 12 | 65 | - | - | |
Pral5820g00002 | 229 | SMART | sant | 12 | 62 | IPR001005 | - | |
Pral5820g00002 | 229 | SMART | sant | 65 | 113 | IPR001005 | - | |
Pral5820g00002 | 229 | MobiDBLite | consensus disorder prediction | 131 | 162 | - | - | |
Pral5820g00002 | 229 | Pfam | Myb-like DNA-binding domain | 66 | 111 | IPR001005 | - | |
Pral5820g00002 | 229 | Pfam | Myb-like DNA-binding domain | 13 | 60 | IPR001005 | - | |
Pral5820g00002 | 229 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 8 | 60 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5820g00002 | Pral-Chr5820 | 41941 | 43275 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5820g00002 | 2 | 198 | MYB Transcription Factor Family | AT4G38620 | 50.935 | 1.89e-70 | 215 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Pral5820g00002 | Myb_DNA-binding | 8.3e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5820g00002 | K09422 | - | jre:109008155 | 273.092 |