Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5817g00040 ATGGACTGCAATAGAGAAGAGGCCGTAAGGGCTAAGAATGTTGCAGAAAAGAAGATGGAAAACAAAGATTTCACAGGGGCCCGTAAAATTGCTATTAAGGCTCAGCAACTATTTCCTGATCTGGAGAATATAGCTCAGATGCTTATTGTTTGTGATGTTCATTGCTCCGCAGAGAAGAAATTTTGCAATGAAAAGGACTGGTACGGAATTCTTCAAGTAGAGCAGACAGCTGATGAAGCAACAATAAGGAAGCAATACAGGAAGTTCGCTCTCCTACTTCATCCTGATAAAAACAAGTTTGCTGGTGCTGAAGCCGCATTTAAGCTGATAGGGGAAGCTCAGGCAGTGCTTTTGGACAGGCAGAAACGAGCTGCACATGACAGAAGCAGAACTTCATATTGTGCACCACGGAATATTTTTGTGAATGTTGATACTGGGGTGCAAACCCATAATAGGGCCAATTTCACAGACTTGAATCCTCAGCAGGGGTTTAATAATGGCTCCTCTACATTTTGGACTGTTTGCCCATTCTGTTCTATTAGATTTCAATATTACTTAGAAGTTCTAAATCGATCTCTGCGTTGTCAAAGTTGCAACAGGCCCTTTGTCGCTTATGACATAAGTATGCAAGGTACAGTTCCACCAGCCCATTCAAGTCCGCATCCTTTTGTGCAGCCACAAGATGGTCCGAATCATCATTCGGTTAAGGTGGATGTTGGATCTCAAGGTAAATCACATGGTAGAAATGTCAATGCAAAGCCTTTTGATAAGAAATTCCCAACGTCCCGTGTATCTAGAAAGCTTAATAGAAAACGGCAGAGGGAGCAAGTAGTGGAAATTAGTGAAAGTTCTGATTCCGTACACAGCTCTGATTCTGAGAGTGGTATGGCTTCTGATGATATCATTTCTGATGAGGATGGCATTACTAATGAACGAAACCATGCCACTTTTAGAGAAGAAAATCCTCGCAGATCTTCACGGAAAAAACAGCAGGTTTCTTACAAGGAAAATGTGAGTGATGGTGACGATGATGGCATAAATGTTTCAAAAAGGGTGAACGGTTTGGCTGATGATCTAGAATATCGCAAGAAAGGGTTAAAGCAGAAGCAGAAGCGGAAGCATGGTCTTTATCCTGAAGACATATTACTGAATAGAAAGGAGGAGACTAAGGAGGTGTTGGGAAAAGCAGTGCAAGGTTCAAAGACGGCTGCTGAAGTTAATGAGCATTGTGTCCCCAATTCAGCCTGCAATATAACAGAGCAGCCTAATATTATAGTCTGTCCTGATGCAGAGTTTAATGACTTTGACAAGGACAAGCAGAAAGATTGTTTTGCAGTTGGGCAGGTTTGGGCTGTTTATGATACAAATGATGGCATGCCTAGATTCTATGCTCTAATTAAGAAAGTTTTCTCCTCTGGGTTCAAGCTGCGGATAACATGGTTTGAACCAGAACCGAGTAATGAGGATGAAATTAATTGGGTAAACAAGCAATTGCCGGTTGCCTGTGGAAAGTATGGGCTTAGACACTCCGAAACCACAGAAGATCATCCCATGTTTTCTCATCGAGTTCTGTGTGAAAAAATTGGAAGTAATGCTTTTGAAGTTTATCCTAGAAAGGGAGAAACCTGGGCTCTCTATAAAAATTGGGATATCAAATGGTATATGGACGTGGAATCTCATCCAAAGTATGACTTTGAGTTCGTTGAAATATTGACGGACTATGTTGAAGGTGAGGGTGTATTTATTGCATACTTGGCTAAATTGAAAGGCTTCGTGAGTCTCTTCTCTAGAATTATGAAGGAAGGCGCCTACCCAATCAAAATTCCCTCAGCAGAGTTATTCAGATTCTCTCACAGGGTTCCGTCTTTTAAGATGACTGGTCAGGAAAGAGTAGGTGTTCCTGTAGGATCTTGGGAACTTGATCCTGCGTCTTTGCCTTCGCCTTTGAACCTCGAAGAGGTTGCTGTTCCCATTGATTTGGAAGTGAAGGATGGTCATTCCCCATCCAGTGGTGTGAGTAGAAGATCTTCAGAGAGATTGAAGCCCATGGTGGCACCTGATAGGAATTTACATGCTTTCCGGGATAATTTTGAAACAAGCAATTTGGCGAAGAACAATGGTTCAGTTAACTTTGTTGAAGATAGTAGTGCTCCTCTGTCTTCGACCCCAGAAGCTATGGAAATTCCTGATCCTCAGTTCTACAATTTTGACGATGGGAAGGCCCCGGAGAAGTTTCATGTTGGTCAGATTTGGGCATTTTATAGTGATGAAGATGGCCTGCCAAGGTACTATGGTGAGATTGTGGAAATCAAGAGGAGCCCTGGTTTTGAATTGCATATTATGTGGCTTGCTTCCTGCTGGCTGCCAGATAACACTATTAGATGGGAAGACAAAGACATGCTTATATCTTGTGGCAGGTTCAAAAGTAGAAATGGGAATACAAATGTTTATACGAACACCCTCTCCCTTTCACATCTGGTACGGGTCAATTTTGACAGAAAGGACAATGAATATTCCATCTTTCCAAGGAAAGGTGAAGTTTGGGCATTATATAGGAAATGGACGCCTAAAATCAAATGCTCCGATCTGGTAAACTGGGAGTATGACATAGTGGAAATTATTGAGGAAAATGCCTCTTGGATTGAAGTTTTAGTCATGGAGATCGTTAGTGGATATAATTCAGTTTTCAAGCCGAAAACATTTGAAGGATCACCCATCACTATGAGAGTACCCCAGGCACAGTTGCTCAGGTTCTCCCACCAAATCCCAGAATTCAAACTTACAGAGAAGCATGGCAGTCTGAAGGGCTTCTGGGAGCTTGATCCAGGAGCTGTACCCGTTCACTTTTGGACTTCCCAGTAA 2862 0.4221 MDCNREEAVRAKNVAEKKMENKDFTGARKIAIKAQQLFPDLENIAQMLIVCDVHCSAEKKFCNEKDWYGILQVEQTADEATIRKQYRKFALLLHPDKNKFAGAEAAFKLIGEAQAVLLDRQKRAAHDRSRTSYCAPRNIFVNVDTGVQTHNRANFTDLNPQQGFNNGSSTFWTVCPFCSIRFQYYLEVLNRSLRCQSCNRPFVAYDISMQGTVPPAHSSPHPFVQPQDGPNHHSVKVDVGSQGKSHGRNVNAKPFDKKFPTSRVSRKLNRKRQREQVVEISESSDSVHSSDSESGMASDDIISDEDGITNERNHATFREENPRRSSRKKQQVSYKENVSDGDDDGINVSKRVNGLADDLEYRKKGLKQKQKRKHGLYPEDILLNRKEETKEVLGKAVQGSKTAAEVNEHCVPNSACNITEQPNIIVCPDAEFNDFDKDKQKDCFAVGQVWAVYDTNDGMPRFYALIKKVFSSGFKLRITWFEPEPSNEDEINWVNKQLPVACGKYGLRHSETTEDHPMFSHRVLCEKIGSNAFEVYPRKGETWALYKNWDIKWYMDVESHPKYDFEFVEILTDYVEGEGVFIAYLAKLKGFVSLFSRIMKEGAYPIKIPSAELFRFSHRVPSFKMTGQERVGVPVGSWELDPASLPSPLNLEEVAVPIDLEVKDGHSPSSGVSRRSSERLKPMVAPDRNLHAFRDNFETSNLAKNNGSVNFVEDSSAPLSSTPEAMEIPDPQFYNFDDGKAPEKFHVGQIWAFYSDEDGLPRYYGEIVEIKRSPGFELHIMWLASCWLPDNTIRWEDKDMLISCGRFKSRNGNTNVYTNTLSLSHLVRVNFDRKDNEYSIFPRKGEVWALYRKWTPKIKCSDLVNWEYDIVEIIEENASWIEVLVMEIVSGYNSVFKPKTFEGSPITMRVPQAQLLRFSHQIPEFKLTEKHGSLKGFWELDPGAVPVHFWTSQ 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5817g00040 953 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Pral5817g00040 953 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pral5817g00040 953 MobiDBLite consensus disorder prediction 282 297 - -
Pral5817g00040 953 MobiDBLite consensus disorder prediction 213 349 - -
Pral5817g00040 953 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 696 - -
Pral5817g00040 953 MobiDBLite consensus disorder prediction 305 347 - -
Pral5817g00040 953 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pral5817g00040 953 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pral5817g00040 953 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pral5817g00040 953 SMART dnaj_3 65 122 IPR001623 -
Pral5817g00040 953 Pfam Domain of unknown function (DUF3444) 724 930 IPR024593 -
Pral5817g00040 953 Pfam Domain of unknown function (DUF3444) 423 629 IPR024593 -
Pral5817g00040 953 CDD DnaJ 66 119 IPR001623 -
Pral5817g00040 953 Gene3D DnaJ domain 62 172 IPR036869 -
Pral5817g00040 953 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5817g00040 Pral-Chr5817 282302 286583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5817g00040 4 207 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.143 1.07e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5817g00040 - - gmx:100779228 1080.86