Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5817g00025 ATGGGTGGGTGTTTTCCTTGCTTTGGATCAAAGAAGGATGACCAAGGGTTGAAGGAAGTAGCAGTCAAGAAGGATTCCTTTAAAGAAGGCTCAATTGTTGCTAAGTCTAACCATACCAATAGGGTTAACTCAGATAAATCAAAATCGAAAAGCAGCTTTGATCCCAAGAAGGAACCACCCGTTCCCAAGGAACCAACAGCCCATATTGCTGCACAAACATTCACATTCCGAGAGCTTGCAGCTGCTACAAAGAATTTTAGGCCAGAATGCTTAATAGGTGAAGGGGGTTTCGGACGTGTCTACAAAGGTCGCCTTGAGAGCACAGGACAAGTAGTTGCTGTAAAACAGCTTGATCGCAATGGCCTTCAAGGAAATCGGGAATTCTTGGTGGAGGTTCTCATGCTTAGCCTCTTGCATCATCCCAATCTTGTCAACTTAATTGGTTATTGTGCTGATGGTGATCAGAGGCTCCTTGTTTATGAATTTATGCCATTGGGCTCTTTGGAGGATCATTTACATGATCTTCCTCCTGACAAGGACCCTCTAGACTGGAACACAAGAATGAAAATTGCCGCTGGTGCTGCTAAGGGATTGGAATATTTGCATGACAAAGCAAATCCCCCTGTTATTTACAGAGACTTAAAGTCATCCAACATCCTCCTTGATGAGGGTTTTCATCCCAAGCTATCAGATTTTGGGCTTGCGAAGCTTGGTCCTGTTGGTGATAAGACGCATGTATCTACACGAGTAATGGGAACATATGGCTACTGTGCTCCAGAGTATGCCATGACAGGCCAACTAACTCTAAAGTCTGATGTATATAGCTTTGGAGTTGTCTTTCTTGAACTTATTACTGGACGCAAAGCTATTGATAATACCCGTGCACCTGGAGAGCATAATCTCGTTGCCTGGGCACGACCTCTCTTCAAAGACCGTAGGAAGTTTCCAAAAATGGCTGATCCGCTACTTCAAGGGCGTTACCCAATGCGAGGACTCTACCAAGCACTTGCAGTTGCAGCCATGTGTTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGTGATGTTGTGACTGCTCTCACATACCTGGCCTCACAGACATATGACCCGAATTCAAGCAATCAGAATAGTAGGGTTGGAACACCAAGGAGCAGGGATGACCGAAGGAGCGTAGTAGATGGTGTTATGGATAGCCCTGACCATGGGCGGAGTGGCTCCCCTTCCACACATAAGAACTCGCCTGATGTCCAAAGGAGAGATAGTAGGGATCCAAGTGTTGGGAAAGATTTGGGCAGGAGTGAAACTGGTTCAGGAAGAAGATGGAGATTGGATGATGTAGAAAGGCTGGAATCTCAGAGAGACAGCCCTGTAAATACTGGGAGAGCTAGGGAAACTCCAAGGAACCGTGACCTAGACAGAGAGCGTGCGGTTGCAGAAGCAAAAGTATGGGGTGAGAATTGGAGAGAAAAAAAGAGGGCTAATGCCGTGGGCAGCTTTGATGCAACAAATGAGTGA 1515 0.4614 MGGCFPCFGSKKDDQGLKEVAVKKDSFKEGSIVAKSNHTNRVNSDKSKSKSSFDPKKEPPVPKEPTAHIAAQTFTFRELAAATKNFRPECLIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKDPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNSSNQNSRVGTPRSRDDRRSVVDGVMDSPDHGRSGSPSTHKNSPDVQRRDSRDPSVGKDLGRSETGSGRRWRLDDVERLESQRDSPVNTGRARETPRNRDLDRERAVAEAKVWGENWREKKRANAVGSFDATNE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5817g00025 504 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5817g00025 504 MobiDBLite consensus disorder prediction 381 396 - -
Pral5817g00025 504 Gene3D Phosphorylase Kinase; domain 1 60 162 - -
Pral5817g00025 504 MobiDBLite consensus disorder prediction 367 473 - -
Pral5817g00025 504 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Pral5817g00025 504 Pfam Protein kinase domain 91 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5817g00025 504 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5817g00025 504 Gene3D Transferase(Phosphotransferase) domain 1 163 385 - -
Pral5817g00025 504 MobiDBLite consensus disorder prediction 32 66 - -
Pral5817g00025 504 MobiDBLite consensus disorder prediction 413 454 - -
Pral5817g00025 504 MobiDBLite consensus disorder prediction 41 63 - -
Pral5817g00025 504 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Pral5817g00025 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Pral5817g00025 504 PANTHER OS07G0668900 PROTEIN 4 374 - -
Pral5817g00025 504 FunFam Serine/threonine-protein kinase PBS1 61 162 - -
Pral5817g00025 504 SUPERFAMILY Protein kinase-like (PK-like) 62 360 IPR011009 -
Pral5817g00025 504 CDD STKc_IRAK 92 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5817g00025 Pral-Chr5817 178409 183529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5817g00025 4 395 Glycoside Hydrolase AT3G07070 63.198 2.97e-173 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral5817g00025 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5817g00025 - - gmx:100814575 844.728