Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5817g00014 ATGGCTCCATCTAGAAAATCCAAAAGTGTCACTAAGAGATTTTCAAATATTCGTGAAGCTGTATCTTATGAAGAAAAAAATAGAGAGAATGTTAACAAGACTAGGGCACAGGGTAGTCCTGGCATTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGACCAAAATGGAGTAAGGAGGAGCTTGAGCGTTTCTATGATGCTTACCGTAAATATGGGAAAGACTGGAAGAAGGTGGCTGCTGCAGTGTATCATAGGTCTTTGGAAATGGTAGAAGCTCTGTACTCTATGAATCGAGCATACTTGTCTCTTCCAGAGGGCACTGCTTCTGTAGTTGGACTCATAGCAATGATGACCGATCACTATAGTGTACTGGGAGGAAGTGATAGTGGACAAGAAACCAACGAAGATACGGAAAAATTTAAAAAGCCTCCAAAATTTTCGCAGCAGAAATGTTCATATGGGAACTATAAAGCATCAGATGGAGATTTTTCAGATCATTCTCAGTCACATTCAATTACATCAGGTGACGGCTGCCTGTCATTGTTGAAGAAGAGGCATTCTGGTTTAAGTTCTCACGCTGTTCGGAAAAGGACTCCCCGTGTCCCTGTTTCACATTCCATTCATAAGGATATGGGCAGAAAGTGTTTTTCACCTGCTAGGCAAGGTTACAGGCAAATGGTTGACAGTAATGATGTTGGTCATAAAATTGCTTTAGCACTGACGGAGGCTTTACAAATAGGTGATACTTCCAAAGTTTCGGACTCAACAAACAATAAATCTAAGGGTATTATGTCATCACCCTGTCAGAATAATGGGAGGAAGAACACTAAATCGGAAGTAGCAGGATCCAAATTTTGCCATTTTGACTTGAACGATGGTAGCCCTGAATTAAGTTTACGAAGCACAGGGTGCGGCAGTGGAGATTATTCTTGGAAACTGAGTCAACAGAGCAGCAGAGGAAGAGCTAGAAGAGGAAAAAATGAAGAAAAGGGAACAAAATACTACAGAAAAAAGTTAGAACTCGGAGAAAATGAGAATAAGCATTGGGATGGTGTAAAGGAAGCTTCTAGTGGGACAGACGAAGATAAAGGACTGGATTTAACCAAGGATAAAATTGAAATTAAATTTGCAGCCACAAAAGGTACTAGGTCCTCCTTCAAGAGTCTCAGGAAGAAAAGTGAAAAAGTACTGCTTGAAAAAGAAGATGAAGGTTCTTTTGATGCTTTGAAAGCCTTGGCTGGTCTATCTTTGATGATGCCAGTCGCAAACCCTGACCCCGAGTCACTTGTGCGGGTGAGGGAAGAAAACCAAGGAGCTGTTGATGAGTCTAAAGTGGAAACCCATCATACGATTGTGAGTGATGAAAGCACTGCTTTAGGTAAATTAAGTTTGGTTTCTCCTGGTAATGAAGTTTTTGTTCCTCAAGAAAAGGGCACCTTCCACCTTGATGCTAGAAAGAGGAAGAGAAGACAAACACCTTCAATATTGAAAAATGACGAAACTCAAACCAGTTCTCATTTAAGTGGTTCACAGAAGATCAAGAGGATGATAAGTGACAATCTTGCAATGAGGACAAAGGTGCAACTCCCAGGAATGATGTCTTCAAGTAATGAGGACAAAGGAAGAAGGGATGATTCTCTGCTATTACCCATAGAAGTTTCATCTACAGATAAAGTTGGTTTAGCAAACAAAGGAAGGCATAGAAGAAAGATGGAGAAACCAAAACCAATGGTAGAACAAGATATAAAGGTGCCAGAAAGTATTTTTAGTGGTCAACATAGAAAACCCATTCTCCAGAATAGTGTATCAAGCCACAAGGAAAAGCTTATTAATTGCCTGTCTTCACATCAAATACGGCGATGGTGCACTTTTGAGTGGTTTTACAGTGCTATAGATTACCCATGGTTTGCAAAAAGGGAGTTCATGGAGTACTTGGACCATGTTGGATTGGGGCATGTTCCTAGACTGAGTCGTGTAGAGTGGGGAGTCATTAGGAGTTCTCTTGGCAGACCCCGGAGATTTTCTGAGCAATTTTTGATAGAAGAAAAATCGAAGTTAAATCAATACCGGGACTCAGTTAGGGCACATTATGCAGAACTTCTTGCTGGTACCAGGGATTGCCTTCCAACTGATTTGGCCAGGCCTTTAATTGTTGGACAGCGTGTCATTGCCATTCACCCAAAGACGAGAGAGATTCATGATGGGAGTATACTAACTGTTGACAACTGTTCATGTCGGGTTCAATTTGACCAGCCTGAACTGGGGGTTGAATTAGTCATGGATATTGACTGCATGCCTCTGAATCCTTATGAAAATATGCCAGCATCTCTGATAAGGTACAATGTGATTCCTGCTAAACTAGATGGCAACCTTATTGAGTTCCACCTTAATGGGAAACTGAAACGAGGAAAGATTAAGGAGCACAGAATATTGTACCCTAGCGGGAACTTAGATCATGTTGATGCTCTTCATATAACTCCCTCAGCTAGTGGCGTCAACAATTTATTGAAACAGGGCATTTCTTCAAGTTCCAAATTGCAAGCTAATGTTGCTTGCAATGAGATTGGTAACGCTCGACTGTCAGCAAATTCTAAAGCTTCTTTTCATGTAAATGTCCCGTTCAAAGAAGCTGGCACAAATGCTGTTTTTGAGCTGATTCGTGCTCTTGACAAAAAGGAAATTGTGCTATCTGAACTGAAGAAAATGAATGATGAGGCATGTGAAAGACGGAAATATGGGGACCACTCTTTAAATGATTCAGAGCCATTTAAGAGACATTATGCTGCAGTATTGTTGCAGTTAAATGAAGTGAACGAGCAGGTCTCTTCTGCCTTGTTTTGCGTGAGACAGCATAACACATATCAGGGGAACTCTAATTTATCACCAAGGCCCCTAGCTAATTCGGATGATCTTGGCGGTCAAACTAGCTCTTCGTATTGTTCAGCTTCTCACAACCAAAATTTTCAATCTCATATAGCTGAAATTATTGGAAGTTCTAAAAGAAGAGCCCGCACAATGGTTGGTGCAGCTATGCAGGCGATGTTGTCTTTTACTAAGACAGAAGATAAGGGTGAAGGAATTGAAGAGTCAATTAATTTTATAAATAATCGGCTTTCAGTGGATGACCAAGCTGCTCTGTCCTCGCAATTCATGCCCACAGATTCTGTTCATGTCACTCTAGCTTCTCAGGATCAGATGACTGCAAGTAAATCGAAGCCTTTGTCAAATAATCATTCACAAGATCCTGAGCTAAACAGCTCATCTGATCAAAATGAAGTGAAAATTCCCTCAGAACTTATTTCTCAATGTCTAGCCACCTTGCTGATGATCCAGAAGTGTACAGAGCGACATTTCCCACCTGCCGACGTTGTTCATATGTTAGATTCTGCAGTCACAGGTTTGCAGCCATTTTGTTCAAAGAATCTTCCAATATATGAAGAGATACAGAAATGCATGGGCATAATCAGGAATCAGATATTGGCACTCATACCTACCCAAACTACCTAG 3507 0.4092 MAPSRKSKSVTKRFSNIREAVSYEEKNRENVNKTRAQGSPGIQKKRKLADMLGPKWSKEELERFYDAYRKYGKDWKKVAAAVYHRSLEMVEALYSMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGQETNEDTEKFKKPPKFSQQKCSYGNYKASDGDFSDHSQSHSITSGDGCLSLLKKRHSGLSSHAVRKRTPRVPVSHSIHKDMGRKCFSPARQGYRQMVDSNDVGHKIALALTEALQIGDTSKVSDSTNNKSKGIMSSPCQNNGRKNTKSEVAGSKFCHFDLNDGSPELSLRSTGCGSGDYSWKLSQQSSRGRARRGKNEEKGTKYYRKKLELGENENKHWDGVKEASSGTDEDKGLDLTKDKIEIKFAATKGTRSSFKSLRKKSEKVLLEKEDEGSFDALKALAGLSLMMPVANPDPESLVRVREENQGAVDESKVETHHTIVSDESTALGKLSLVSPGNEVFVPQEKGTFHLDARKRKRRQTPSILKNDETQTSSHLSGSQKIKRMISDNLAMRTKVQLPGMMSSSNEDKGRRDDSLLLPIEVSSTDKVGLANKGRHRRKMEKPKPMVEQDIKVPESIFSGQHRKPILQNSVSSHKEKLINCLSSHQIRRWCTFEWFYSAIDYPWFAKREFMEYLDHVGLGHVPRLSRVEWGVIRSSLGRPRRFSEQFLIEEKSKLNQYRDSVRAHYAELLAGTRDCLPTDLARPLIVGQRVIAIHPKTREIHDGSILTVDNCSCRVQFDQPELGVELVMDIDCMPLNPYENMPASLIRYNVIPAKLDGNLIEFHLNGKLKRGKIKEHRILYPSGNLDHVDALHITPSASGVNNLLKQGISSSSKLQANVACNEIGNARLSANSKASFHVNVPFKEAGTNAVFELIRALDKKEIVLSELKKMNDEACERRKYGDHSLNDSEPFKRHYAAVLLQLNEVNEQVSSALFCVRQHNTYQGNSNLSPRPLANSDDLGGQTSSSYCSASHNQNFQSHIAEIIGSSKRRARTMVGAAMQAMLSFTKTEDKGEGIEESINFINNRLSVDDQAALSSQFMPTDSVHVTLASQDQMTASKSKPLSNNHSQDPELNSSSDQNEVKIPSELISQCLATLLMIQKCTERHFPPADVVHMLDSAVTGLQPFCSKNLPIYEEIQKCMGIIRNQILALIPTQTT 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5817g00014 1168 Gene3D - 2 108 - -
Pral5817g00014 1168 Coils Coil 889 909 - -
Pral5817g00014 1168 MobiDBLite consensus disorder prediction 310 333 - -
Pral5817g00014 1168 SMART sant 52 100 IPR001005 -
Pral5817g00014 1168 Pfam DIRP 626 727 IPR033471 -
Pral5817g00014 1168 CDD SANT 55 90 IPR001005 -
Pral5817g00014 1168 Pfam Myb-like DNA-binding domain 55 88 IPR001005 -
Pral5817g00014 1168 PANTHER LIN-9 1 1167 IPR010561 GO:0006351|GO:0017053
Pral5817g00014 1168 MobiDBLite consensus disorder prediction 24 44 - -
Pral5817g00014 1168 MobiDBLite consensus disorder prediction 1064 1092 - -
Pral5817g00014 1168 ProSiteProfiles SANT domain profile. 51 88 IPR017884 -
Pral5817g00014 1168 MobiDBLite consensus disorder prediction 496 511 - -
Pral5817g00014 1168 SUPERFAMILY Homeodomain-like 52 98 IPR009057 -
Pral5817g00014 1168 MobiDBLite consensus disorder prediction 249 276 - -
Pral5817g00014 1168 Pfam LIN9 C-terminal 882 951 IPR045831 -
Pral5817g00014 1168 MobiDBLite consensus disorder prediction 126 149 - -
Pral5817g00014 1168 SMART DIRP_2 627 728 IPR033471 -
Pral5817g00014 1168 MobiDBLite consensus disorder prediction 482 511 - -
Pral5817g00014 1168 MobiDBLite consensus disorder prediction 957 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5817g00014 Pral-Chr5817 62250 75684 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5817g00014 DIRP 5.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5817g00014 - - pcin:129292382 1808.5