Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5810g00006 ATGCGCCATAACATAGTCATTCTTCGAAACTCCGTCGGAGTGGGTGGTGGAGCAAAATTCCCTCAGAAATACAAGATCAATGATAAACAGCCTATATTCACCATTTCAACATTGAAATACTTAAGGCTTGGCAATAATTCCCTCTCTAGCCTTCTCCCATCATATTTAGGGATTGGCCTTCCCAACTTGGAGAATTTACTACTAGATGATAATGAGATAATTGGACAAATTCCAAACAGCATATCAAATGCTTCTAAGCTCATTAAGTTAAATTTGTCATTGAATAAATTAAATGGATCTATACCCAATGTCATTGGAAATTTAAAAAACTTGTTCGACTTAGCTTTGGATGGGAATGATTTGACTGGGTTGATTCCAGACAGAGTTAGCAACTTACATAAACTTCAACGTTTAAGTCTCAGCAACAACAGATTGCAGGGTTCCATCATAAATGAACTTTGCCAACTCAAAAGTCTAAGTGAGTTGTATCTTGCCAACAACATGTTTTCGGGAGCATTACCAGGATGTCTCGGGAATACTTCTTTGCGGAAGTTGAATTTTAGCTCCAACAAATTGATGTTTCATATACCTTTTTCTTTCTGGAGTCTCAAAGATATCTTAATTTTAGACATATCGTCCAATGCATTGAGTGGATCAATATCGCCAGAGTTATCAAACTTTAGAGCAATTATATTGTTGAACTTGTCAAGAAACCAGATTTCAGGAAGCATCCCTACAACTATGGGTGGCTTGCAAACCTTGATAACTCTATCTTTGGCTAACAACAAATTACAAGGGTCTATTCCTCAATCATTTAGTAGCATGATAAGCATAGAGTCCATGGACCTTTCCCATAATTATTTATCTGGTGTGATTCCAAAGTCCTTAGAGTCATTACTCAATCTTAAATACATTAATCTTTCTTACAATTTGTTGGATGGAGAAATTCCAAATGGTGGTCCTTTTCAAAATTTTACCGCTCAATCTTTTATGATGAATAAAAATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGGAGAGGAAACAAACACAAATCAAACAAAGTGATGCTGGTGATAAAATGCTCAGTGCCTATCATGGTTGTCATTTTGGTCGTTACAAGCATTATCTTTCTAAAGCATAACAGAGACGATTCTAACTATGCAACCAAAAGGGATTTAACAAATTTGGATGCACCAACTAGGATATCCTATTATGAGCTTTTACAGGGAACAAATAGATTTGATGAAAGTAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATATAAAGCAATTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTATTTAACATAGACATGGAAGAAGCATTGAGAAGTTTTGATATTGAATGTGCAGCTATGTGCAATTTACGCCACCGTAATCTCATTAAGATCATTAGTTGTTGCTCGAATGATGATTTCAAGTCTCTAATAATGGAATTCATGTCAACTGGAAGCCTTGATAGATGGTTGTACTCTCATAACTACTGTTTAGATATCCTACAAAGGTTGAATATAATGGTTGATGTGGCAACTGCATTAGAGTATCTTCATCATGGTATTTCTACTCCAATTGTTCATTGTGACATAAAACCAAGTAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGCATGGCTAAACTATTAGGTGAAGGACAGTTGGAAACTCGTACAAAAACATTAGCTACAGTTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGTGGTTTCTTTCAAAGGAGATGTGTATAGCTATGGTATCATGCTAATGGAGATATTTACAAGGAAGAAGCCAACCGATGAAATGTTTGAGGAAGATCTTGGTTTGAAAGATTGGGTTAGCAAATCAACACCACATTCAATCATCAATATTCTAGATGTCAATTTGCTACCTAAAGGGAATTCAAATATAAACAATATATTAGCACATATATCATCAATTTTTGAGTTGGCATTAAGTTGTTGCACTGAATTACCTGAAGCACGAATTATGATGACTGATGTTGTCGTCTCATTGAAAAAGATAAGGTCATATTTATGTAAGATGTTAGAGATGCAGCACTAG 2115 0.3556 MRHNIVILRNSVGVGGGAKFPQKYKINDKQPIFTISTLKYLRLGNNSLSSLLPSYLGIGLPNLENLLLDDNEIIGQIPNSISNASKLIKLNLSLNKLNGSIPNVIGNLKNLFDLALDGNDLTGLIPDRVSNLHKLQRLSLSNNRLQGSIINELCQLKSLSELYLANNMFSGALPGCLGNTSLRKLNFSSNKLMFHIPFSFWSLKDILILDISSNALSGSISPELSNFRAIILLNLSRNQISGSIPTTMGGLQTLITLSLANNKLQGSIPQSFSSMISIESMDLSHNYLSGVIPKSLESLLNLKYINLSYNLLDGEIPNGGPFQNFTAQSFMMNKNLCGKSQLQVQPCRRGNKHKSNKVMLVIKCSVPIMVVILVVTSIIFLKHNRDDSNYATKRDLTNLDAPTRISYYELLQGTNRFDESNLLGSGSFGSVYKAILPNEKIVAVKVFNIDMEEALRSFDIECAAMCNLRHRNLIKIISCCSNDDFKSLIMEFMSTGSLDRWLYSHNYCLDILQRLNIMVDVATALEYLHHGISTPIVHCDIKPSNVLLDEDMVAHLSDFGMAKLLGEGQLETRTKTLATVGYMAPEYGSKGVVSFKGDVYSYGIMLMEIFTRKKPTDEMFEEDLGLKDWVSKSTPHSIINILDVNLLPKGNSNINNILAHISSIFELALSCCTELPEARIMMTDVVVSLKKIRSYLCKMLEMQH 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5810g00006 704 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 59 351 - -
Pral5810g00006 704 ProSitePatterns Protein kinases ATP-binding region signature. 423 445 IPR017441 GO:0005524
Pral5810g00006 704 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 493 702 - -
Pral5810g00006 704 SMART serkin_6 417 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5810g00006 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Pral5810g00006 704 Pfam Protein kinase domain 418 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5810g00006 704 FunFam Serine-threonine protein kinase plant-type 397 492 - -
Pral5810g00006 704 SMART LRR_typ_2 35 57 IPR003591 -
Pral5810g00006 704 SMART LRR_typ_2 275 298 IPR003591 -
Pral5810g00006 704 SMART LRR_typ_2 251 274 IPR003591 -
Pral5810g00006 704 SMART LRR_typ_2 156 179 IPR003591 -
Pral5810g00006 704 SMART LRR_typ_2 299 323 IPR003591 -
Pral5810g00006 704 SMART LRR_typ_2 60 84 IPR003591 -
Pral5810g00006 704 SMART LRR_typ_2 132 155 IPR003591 -
Pral5810g00006 704 Pfam Leucine Rich Repeat 301 323 IPR001611 GO:0005515
Pral5810g00006 704 Gene3D Transferase(Phosphotransferase) domain 1 493 701 - -
Pral5810g00006 704 SUPERFAMILY Protein kinase-like (PK-like) 396 689 IPR011009 -
Pral5810g00006 704 SUPERFAMILY L domain-like 31 346 - -
Pral5810g00006 704 Gene3D Ribonuclease Inhibitor 22 356 IPR032675 -
Pral5810g00006 704 Gene3D Phosphorylase Kinase; domain 1 379 492 - -
Pral5810g00006 704 ProSiteProfiles Protein kinase domain profile. 417 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5810g00006 704 PANTHER OS04G0122200 PROTEIN 92 694 - -
Pral5810g00006 704 Pfam Leucine rich repeat 114 168 IPR001611 GO:0005515
Pral5810g00006 704 Pfam Leucine rich repeat 233 288 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5810g00006 Pral-Chr5810 83593 87785 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5810g00006 63 698 Receptor kinase-like Gene Family AT3G47570 39.910 1.88e-138 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5810g00006 Pkinase 9.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5810g00006 - K13420 pcin:129285519 955.666