LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5810g00003	ATGCCTTCTTTGACATATGTGGCCTTTGGCATGAATCATTTAAAGGGTAATATGCCTGAAGAAATGTGTCATCATCTCCCTTTACTTGAGGCCTTTGATGTTTATGGTCATCAATTAGAGGGAGGTTTTCTACCCAAAGGGATAGGCAGTCTTGATAAACTTGATAGATTAGACTTATCTTCTAATCATTTCAAAGGACCTATTCCTTTCAACATATTCAACATTTCAACACTGACACTGTTAAACCTTGGGAGCAACTTCCTCTCTGGCCTTCTCCCATCATATTTAGGAATTGGCCTCCCTAACTTGAAGAATTTAGTGCTGGAAGGAAATGAACTAACTGGACAAATTCCAAACAGCATATCAAATGCTTCTCAGCTTATTAGGTTGCGTTTACCATTGAATACATTTACCAAAGCTATACCCAATGTAATTGGAAATTTAACAAACTTGCTTGACTTAGCTTTGGATGGGAATGAATTGACTGGGTTGATTCCGTATACATTTGGCAAATTACATAGCCTTCAAGGCTTAAGTCTTAGCAACAACAAATTACAAGGGTCCATTGTAAATGACCTTTGCCAACTCAAAAGGCTAAGCATTATCTTTCTAAAGCAAAATAGAGATGATGCTAACTATACAACCAAAAGGGATTTAACAAATTTGGATGGACCAACTAGGATATCCCATTGTGAGATTCTACAGGGTACAAATGGATTTGATGAGAGCAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTGTACAAAGCAATTCTTCCAAATGAAAAGGTAGTTGCTATCAAAGTATTTAACACAGACATGGAAAAAGCATTGAGAAGTTTTGATATTGAATGTGATGCCATGTGCAATTTACGCCATCGCAATCTCATTAAGATTATTAGTTGTTGCTCAAATAATGATTTCAAGTGTCTAATAATGGAATTCATGTCAAATGGAAGTCTTGATAGATGGTTGTACTCTCATAACTACTGTTTGGATATCCTACAAAGGTTGAATATAATGGTTGATGTAGCAATTGCATTAGAGTATCTTCATCACGGTACTTCTACTCCAATTGTTTATTGTGACATAAAACCAAGCAATGTTTTGTTTAATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATAGCTAAACTATTAGGTGAAAGACAGTTGGAAACTTACACAACAACATTGGCTACAGTTGGTTACATGGCACCAGGTAATAGTCACTACAAAAAAACAGACAATAAAATGTTTTGCGAGGGAAATTAG	1278	0.3592	MPSLTYVAFGMNHLKGNMPEEMCHHLPLLEAFDVYGHQLEGGFLPKGIGSLDKLDRLDLSSNHFKGPIPFNIFNISTLTLLNLGSNFLSGLLPSYLGIGLPNLKNLVLEGNELTGQIPNSISNASQLIRLRLPLNTFTKAIPNVIGNLTNLLDLALDGNELTGLIPYTFGKLHSLQGLSLSNNKLQGSIVNDLCQLKRLSIIFLKQNRDDANYTTKRDLTNLDGPTRISHCEILQGTNGFDESNLLGSGSFGSVYKAILPNEKVVAIKVFNTDMEKALRSFDIECDAMCNLRHRNLIKIISCCSNNDFKCLIMEFMSNGSLDRWLYSHNYCLDILQRLNIMVDVAIALEYLHHGTSTPIVYCDIKPSNVLFNEDMVAHLSDFGIAKLLGERQLETYTTTLATVGYMAPGNSHYKKTDNKMFCEGN	425

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5810g00003	425	SUPERFAMILY	Protein kinase-like (PK-like)	220	408	IPR011009	-
	Pral5810g00003	425	Pfam	Protein kinase domain	241	409	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5810g00003	425	SUPERFAMILY	L domain-like	2	210	-	-
	Pral5810g00003	425	ProSiteProfiles	Protein kinase domain profile.	240	425	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5810g00003	425	FunFam	Leucine-rich repeat receptor protein kinase EMS1	95	192	-	-
	Pral5810g00003	425	Gene3D	Transferase(Phosphotransferase) domain 1	316	420	-	-
	Pral5810g00003	425	ProSitePatterns	Protein kinases ATP-binding region signature.	246	268	IPR017441	GO:0005524
	Pral5810g00003	425	SMART	serkin_6	240	421	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5810g00003	425	PANTHER	OS04G0122200 PROTEIN	215	408	-	-
	Pral5810g00003	425	FunFam	Serine-threonine protein kinase plant-type	220	315	-	-
	Pral5810g00003	425	SMART	LRR_typ_2	148	171	IPR003591	-
	Pral5810g00003	425	SMART	LRR_typ_2	100	124	IPR003591	-
	Pral5810g00003	425	SMART	LRR_typ_2	51	75	IPR003591	-
	Pral5810g00003	425	SMART	LRR_typ_2	172	196	IPR003591	-
	Pral5810g00003	425	Gene3D	Ribonuclease Inhibitor	1	221	IPR032675	-
	Pral5810g00003	425	Gene3D	Phosphorylase Kinase; domain 1	223	315	-	-
	Pral5810g00003	425	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	359	371	IPR008271	GO:0004672\|GO:0006468
	Pral5810g00003	425	Pfam	Leucine rich repeat	150	208	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5810g00003	Pral-Chr5810	54916	59348	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5810g00003	4	408	Receptor kinase-like Gene Family	AT3G47570	35.185	3.24e-71	240

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Pral5810g00003		Pkinase	9.7e-36	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5810g00003	-		K13420	pcin:129285519	380.948