Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5807g00004 ATGAGTACCAACATTGAGAATCATGAATATGATTCTAATTCCTCTTCTTTTAATCCTATGATGTTGCCAACTGATCATATTTACCTTGCAGTGTTAAATGCTGCTATTGAGCTGAACTTGTTTGAGATCATTGGCAAGGGAAGCCCTAAGGGCATGTCCTCCTCTGAAATAGCTTCAAAGCTCGAAAATCCTCACGCTAGCATGGCTAACCGGCTAGATCGAATGTTGTTTTTGCTTTCCAATTACTCTCTCTTGATTTGTTCTTACAACAAACTTGATCAACCTGACAAGATTGAGAGGCTTTATAGCATATCACCTCATGGCAAATACTTAATTGTAGAAAAAGATGAAACCTCCTGCGTTAGATTCTTCAAATTATGCAATCATCCCACTTACATAAAAATTTGGCAAAACTTCAAGCAAGTGATTCTTGACGAGGAAGAGAACCTTTTCAAGAAAGTTCATGGGATGCCTATGTATAAATACATGGAAATGGATCCAACATTCAAAACTACTTTTCATAAGGCAATGGCTGACTTGTCAATTATGCAGATTAAGGATGTACTTGAGACATATGAAGGATTTGAGGGAATATCCACACTTGTTGATGTAGCTGGTGGCGTTGGCCAAAACCTTAAAATGATCATTTCGAAGTATCCTTCCATTCAAGGCATTAATTTTGACTTGCCACACGTGGTACAACATGGCCTATCTCATCCAGGAATGAAGCATCTTGGAGGAGATATGTTCAAAAGCGTTCCAGAAGGCGATGCTATGATGATGAAGTTTATAACTCATAACTGGGGAGATGAAAAATGCATACAGATTTTAAGAAACTGCCATAGATCTCTCAAAAACGAAGGCAAGCTTATTATTATTGACCCGATAATGCCAGAAATACCGAATGGAAGCGACGAGCATAAGTATGTATCAGTTCTTGACAACCTTATGTTCCTGCAATCGGGTGGGAAGGAAAGAACAGAGAAAGAATTTGAAGCTCTTTGCAAAGATAGTGGCTTTTCTAGCTACCGTATCGCAGCTCACGTTGCCTACGCTGCTTTAGGAGTCATTGAGTTTTATAAATAA 1086 0.3867 MSTNIENHEYDSNSSSFNPMMLPTDHIYLAVLNAAIELNLFEIIGKGSPKGMSSSEIASKLENPHASMANRLDRMLFLLSNYSLLICSYNKLDQPDKIERLYSISPHGKYLIVEKDETSCVRFFKLCNHPTYIKIWQNFKQVILDEEENLFKKVHGMPMYKYMEMDPTFKTTFHKAMADLSIMQIKDVLETYEGFEGISTLVDVAGGVGQNLKMIISKYPSIQGINFDLPHVVQHGLSHPGMKHLGGDMFKSVPEGDAMMMKFITHNWGDEKCIQILRNCHRSLKNEGKLIIIDPIMPEIPNGSDEHKYVSVLDNLMFLQSGGKERTEKEFEALCKDSGFSSYRIAAHVAYAALGVIEFYK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5807g00004 361 FunFam Caffeic acid 3-O-methyltransferase 1 111 - -
Pral5807g00004 361 Gene3D Vaccinia Virus protein VP39 112 361 IPR029063 -
Pral5807g00004 361 Gene3D - 1 111 IPR036388 -
Pral5807g00004 361 Pfam O-methyltransferase domain 136 341 IPR001077 GO:0008171
Pral5807g00004 361 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Pral5807g00004 361 SUPERFAMILY "Winged helix" DNA-binding domain 22 112 IPR036390 -
Pral5807g00004 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 346 IPR029063 -
Pral5807g00004 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Pral5807g00004 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
Pral5807g00004 361 PANTHER O-METHYLTRANSFERASE 28 350 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5807g00004 Pral-Chr5807 47568 49631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5807g00004 3 347 Monolignol Biosynthesis Gene Families AT5G54160 43.804 6.96e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5807g00004 - - gmx:100798347 362.844