Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5807g00002 ATGAGTACCAAGATTGAGAATCATGAATATGATTCTAGTTCCTCTTTAAATTCTTTGTTGTTGGCATCTGATCCCATTTACCTTGCAGTGTTAAATGCTGCTATTGAGTTGAACTTGTTTGAGATAATTGGTAAGGGAAACCCCAAAGGCATGTCCCCCTCTGAAATTGCTTCCAAGCTCGAAAATCCATATGCGGGCATGGCTCGTCGGCTTGACCGAATGTTGTTTTTGCTTTCTAATTATTCTCTCTTGACTTGTTCTTCCAACAAACTTAATGAGAGGTTTTATGCTCTATCTCCTAGCGGTAAATACTTAATCCCCGATGAAGATGAAACCTCCAGCATTGTATTCTTCAAATTATGTAATCATCCCGCCTACGTAAAAATTTGGAAAAACTTCAAGCAAGTGATTCTTGATGAGGAAGAGGACCTGTTCAAGAAAGTTCATGGGATGCCTGTGTATGAATATATGGAAATGGACCCAACATTCAAAACTGCTTTTCACAGGGCAATGGCTGATTTGTCAACCATGATGATGAAGTATGTACTTGCGACTTACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTGGGTAATGGCATTGGCCAAAGCCTCAAAATGATCATTTCCAAGTATCCTTCAATTCAGGGCATTAACCTTGACTTGCCACAAGTGATACAACATGCATTATCCTGTCCAGCTTCCTGA 711 0.3966 MSTKIENHEYDSSSSLNSLLLASDPIYLAVLNAAIELNLFEIIGKGNPKGMSPSEIASKLENPYAGMARRLDRMLFLLSNYSLLTCSSNKLNERFYALSPSGKYLIPDEDETSSIVFFKLCNHPAYVKIWKNFKQVILDEEEDLFKKVHGMPVYEYMEMDPTFKTAFHRAMADLSTMMMKYVLATYKGFEGISTLVDVGNGIGQSLKMIISKYPSIQGINLDLPQVIQHALSCPAS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5807g00002 236 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pral5807g00002 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 230 IPR029063 -
Pral5807g00002 236 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 236 IPR016461 GO:0008168
Pral5807g00002 236 SUPERFAMILY "Winged helix" DNA-binding domain 21 110 IPR036390 -
Pral5807g00002 236 PANTHER O-METHYLTRANSFERASE 28 230 IPR016461 GO:0008168
Pral5807g00002 236 FunFam Caffeic acid 3-O-methyltransferase 1 105 - -
Pral5807g00002 236 Pfam O-methyltransferase domain 130 230 IPR001077 GO:0008171
Pral5807g00002 236 Gene3D - 1 105 IPR036388 -
Pral5807g00002 236 Gene3D Vaccinia Virus protein VP39 106 235 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5807g00002 Pral-Chr5807 9398 10365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5807g00002 11 235 Monolignol Biosynthesis Gene Families AT5G54160 46.121 1.82e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5807g00002 - - gmx:100784030 224.942