Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5807g00001 ATGAGTACCAACATTGAGAATCATGAATATGATTCTAATTCCTCTTTAAATCCTCTGGTGTTGGCGTCTGATCCCATTTACCTTGCAGTGTTAAATGCTGCTATTGATCTGAACTTGTTTGAGATCATTGGTAAAGGAAGCCCTGAAGGCATGTCTCCCTCTAAAATCGCTTCCAAGCTCGAAAATCCATATGCTGGCATGGCTCGTCGGCTTGACCGAATGCAAAACTTCAAGCAAGTGATTCTTGATGAGGAAGAGGACCTGTTCAAGAAATTTCATTGGATGCCTATGTATGAATATATGGAAATGGATCCAACTTTCAAAACTATTTTTCATGGGCGGTGCAATGGCTGTTTGTCAACCATGATGATGAAGTATGTACTTGAGACATACAAAGGATTTGAGGGAATAACACTTGTTGATGTGGGTGGTGGCATTGGCCAAAGCCTCAAAATGGTCATTTCCAAGTATCCTTCAATTCAGGCATTACTTTGA 495 0.4061 MSTNIENHEYDSNSSLNPLVLASDPIYLAVLNAAIDLNLFEIIGKGSPEGMSPSKIASKLENPYAGMARRLDRMQNFKQVILDEEEDLFKKFHWMPMYEYMEMDPTFKTIFHGRCNGCLSTMMMKYVLETYKGFEGITLVDVGGGIGQSLKMVISKYPSIQALL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5807g00001 164 Gene3D Vaccinia Virus protein VP39 108 162 IPR029063 -
Pral5807g00001 164 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 72 162 IPR029063 -
Pral5807g00001 164 SUPERFAMILY "Winged helix" DNA-binding domain 21 74 IPR036390 -
Pral5807g00001 164 Gene3D - 1 76 IPR036388 -
Pral5807g00001 164 Pfam Dimerisation domain 30 74 IPR012967 GO:0046983
Pral5807g00001 164 PANTHER O-METHYLTRANSFERASE 85 161 IPR016461 GO:0008168
Pral5807g00001 164 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 133 147 IPR022657 -
Pral5807g00001 164 Gene3D - 90 127 IPR036388 -
Pral5807g00001 164 Pfam O-methyltransferase domain 77 162 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5807g00001 Pral-Chr5807 569 1314 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5807g00001 89 163 Monolignol Biosynthesis Gene Families AT5G54160 53.247 2.44e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5807g00001 K13066 - pcin:129314120 117.087