Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5806g00002 ATGGCTTCTAGGAACCAGAACAGGCCGCCGCAGAGCCCCTTAAATAAAAAGGCAGCTGCTGAAGAAAACCCCCTTGACAAACGTCGGAGGATTGGAGCAGAAAGGATGGAAAGACTGGGAACCACCGGCAGGGGAAGGAGGCCATTTACCTCAGTGAACAAAGGGCCTGAAACTAATACAGCAAATGATGTTGGCGGTGCCGATGGTTCAGAGTGTAGCACTGTCGAGTACACCAAAGAAAACGTGGAGGCCTTATTGAACGAGAAGCCGATAAAGGGAAACCCATATGATAATAAGAAAAAAATGGAGCATATGGCAGATCTTATTAAGAGGTTTAAGCAGTGTGCAAAGTACTTACAAAAAGAAAAGGAAGATCTTCAGTCTGCAATTGAATCTGCTGAGAAGAAGTGCACTGATACTGAGACTCAAATGAAAAATAAGATTGAGGAGTTGAATGAGACAATATCAGATTTGCGACAGACAAATTCTTCTTTGGAAGAGAAAATTGCAAAGGAAGAGTCGTGTAAGATGGAAGCAATTGAATGTCATAGAAGAGAAAAGGAAGCCAGAAGTGCGGCTGAAAAGGTGCAAGATTCCCTTTCAACTGAGCTTGAGAAAGTTCGGCAAGAGAAATTAGTTCTTGAGCGGAAGGCAAATTCAAACGAGGACTTGTACAAGCGTTCTCAAGAGTATAATATGAGTCTACAACATTATAACAGTCGCCTCCAGTCAGATCTTGAATCAACCAATGAATCACATAAAAGACTGGAAATGGAGAAAGCGACCATTGTTGAAAACCTAAGCAATGTAAGAGGTCACAACAAGGCATTGCAGGATCAGTTGGCATCTGTTAAAGCTTCAATGGAAGAGGCTACAAAGCAAAAAGATGTGCTAGTACAGGAGCTGAATTGTCTTCGTGAAGAATTGAAACAAATTAGAGATGATCGTGACCGGCAATTGGGACAAGTAAAGGCTTTAACTGATGAAGTAGCATACTACAAAGAATTTACAGGGAATTCATGCGCACAATTGGATAACCTGACAATTAAAATAAATGCTCTCGAGGAGACATGTTCTTCTCAAAGAGAGCAAATAAATATACTGCAACAACAGCTTGCTGCTAAAATGGAGAAATTAAAGATGGCCGACTTATCTGTTTCAGAAACAAGAACAAGTTTTGAGGAGCAGAAAAGACTTATACATGAACTACAAGATCGTCTAGCTGATAAAGAATTCCAAGTGATTGAGGGAGAGAAATTAAGGAAAAAATTACACAACACTATCCTTGAGCTTAAAGGGAACATTCGCGTGTTTTGCCGAGTGCGACCTTTGCTACCAGATGATGGTGTTGGGACAGACATGGTTGTTTCTTATCCTACATCAACAGAAGCTCTTGGCCGAGGAATTGAATTGGTACAAAGCGGGCAAAAATATCCTTTTACATTTGATAAGGTCTTCAATCACGAGGCTTCTCAGCAGGATGTTTTCATCGAAATATCGCAATTGGTACAAAGTGCGCTTGATGGCTACAAGGTATGCATATTTGCATATGGTCAGACAGGTTCTGGCAAGACCTATACAATGATGGGCAGGCCTGATACCCCAGATTTGAAAGGATTGATACCACGTTCTCTAGAACAGATTTTCCAGACTAGTCAAGCCCTCAAAGATCAGGGGTGGAGCTACAAAATGCAGGCTTCAATACTGGAAATATATAATGAGACTATTCGGGATTTGTTGGCATCAAATCGGTCCAGTGGCATTGATCAGACACGAACTGAGAATGGTGTTCCTGGGAAGCAACAATACACTATTAAACATGATGCCAACGGAAACACGCATGTTTCTGACCTCACTATTGTGGACGTTCGTAGTGTAAATGAGATTTCATCTCTTCTTCAACAGGCTGCGCAGTGCAGGTCGGTAGGAAGAACCCAAATGAATGAACAGTCATCAAGAAGCCATTTTGTCTTTACTCTGCGGATATGTGGATTTAATGAGAATACTGAACAACAAGTGCAAGGTGTCTTAAATTTGATTGATTTGGCTGGAAGTGAAAGACTGTCCAGGAGTGGGGCCACTGGGGACCGACTTAAGGAAACCCAGGCTATCAACAAAAGTTTATCATCTTTGAGCGATGTCATATTTGCTTTGGCCAAGAAAGAAGAGCATGTTCCTTTCAGGAATTCAAAATTGACATACCTTCTCCAGCCATGTCTTGGGGGAGATTCAAAAACATTGATGTTTGTAAATGTCTCACCTGATGCTTCTTCTTCTGGAGAGTCCCTTTGCTCTCTTCGCTTTGCTGCCAGAGTCAATGCCTGTGAAATTGGTATTCCAAGGCGTCAAACATCAGCCAAGTCTTTTGATTCTCGGCTAAGCTATGGGTGA 2391 0.4182 MASRNQNRPPQSPLNKKAAAEENPLDKRRRIGAERMERLGTTGRGRRPFTSVNKGPETNTANDVGGADGSECSTVEYTKENVEALLNEKPIKGNPYDNKKKMEHMADLIKRFKQCAKYLQKEKEDLQSAIESAEKKCTDTETQMKNKIEELNETISDLRQTNSSLEEKIAKEESCKMEAIECHRREKEARSAAEKVQDSLSTELEKVRQEKLVLERKANSNEDLYKRSQEYNMSLQHYNSRLQSDLESTNESHKRLEMEKATIVENLSNVRGHNKALQDQLASVKASMEEATKQKDVLVQELNCLREELKQIRDDRDRQLGQVKALTDEVAYYKEFTGNSCAQLDNLTIKINALEETCSSQREQINILQQQLAAKMEKLKMADLSVSETRTSFEEQKRLIHELQDRLADKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGVGTDMVVSYPTSTEALGRGIELVQSGQKYPFTFDKVFNHEASQQDVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDTPDLKGLIPRSLEQIFQTSQALKDQGWSYKMQASILEIYNETIRDLLASNRSSGIDQTRTENGVPGKQQYTIKHDANGNTHVSDLTIVDVRSVNEISSLLQQAAQCRSVGRTQMNEQSSRSHFVFTLRICGFNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDASSSGESLCSLRFAARVNACEIGIPRRQTSAKSFDSRLSYG 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5806g00002 796 SMART kinesin_4 432 783 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5806g00002 796 Coils Coil 116 175 - -
Pral5806g00002 796 MobiDBLite consensus disorder prediction 1 71 - -
Pral5806g00002 796 MobiDBLite consensus disorder prediction 46 67 - -
Pral5806g00002 796 Coils Coil 190 224 - -
Pral5806g00002 796 Coils Coil 239 259 - -
Pral5806g00002 796 ProSiteProfiles Kinesin motor domain profile. 434 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5806g00002 796 MobiDBLite consensus disorder prediction 20 42 - -
Pral5806g00002 796 CDD KISc_C_terminal 432 777 - -
Pral5806g00002 796 PANTHER KINESIN-LIKE PROTEIN KLP-3 281 783 IPR027640 GO:0003777|GO:0007018
Pral5806g00002 796 ProSitePatterns Kinesin motor domain signature. 675 686 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pral5806g00002 796 Coils Coil 344 378 - -
Pral5806g00002 796 Coils Coil 393 413 - -
Pral5806g00002 796 Gene3D - 263 437 - -
Pral5806g00002 796 PRINTS Kinesin heavy chain signature 725 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5806g00002 796 PRINTS Kinesin heavy chain signature 509 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5806g00002 796 PRINTS Kinesin heavy chain signature 676 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5806g00002 796 PRINTS Kinesin heavy chain signature 645 662 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5806g00002 796 Gene3D Kinesin motor domain 438 775 IPR036961 -
Pral5806g00002 796 Coils Coil 274 329 - -
Pral5806g00002 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 773 IPR027417 -
Pral5806g00002 796 Pfam Kinesin motor domain 440 773 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral5806g00002 796 FunFam Kinesin-like protein 380 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5806g00002 Pral-Chr5806 9817 17414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5806g00002 343 787 Calmodulin-binding Proteins AT5G65930 36.044 6.74e-77 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5806g00002 K10405 - gmx:100818473 1209.13