Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5805g00002 ATGAAAGTCTTCGCCTCGTCTCATCAAACACCAATTAAGAACAAACCCTTCTTCAACCTCGCCATGGTTACTCACAGATACTTCTTACTCTTCTTCTTTTTTATCAGTAGCTTCCTCTGTTCTGCTACCATTGAAGCATTACGACCTACTTATCTTTACCACAACTGCTCCACCGCCGGAAAAAGCTTCTCTGCTAATAGTACCTTCCAATCCCACCGGACCACCCTCCTCTCCTCCTTAGCTTCAGCCAATGCCGCCTTCTACAACACCACCGTTCCTGGAGGCAGTGAAGCCATCTACGGCCTCTTCATGTGCCGGGGCGACGTCTCCCTCCAGGTCTGCCGCGAATGCGTCGCTAACGCAACCCAACTGCTACCTTCTGAGTGCCGGTTTTCGAAGGAGGCCGTAATCTGGTACGACGAGTGCATGCTTCGCTATTCCAACACCTCTTTCTTCTCCACCATTGATAAATGGCCGACCGTCGTCATATTGAACCCGTACAATATCTCCAACTCGCACCAGGCAAGATTCAAGAATTTCTTGCTGAATTTTATGAATGAGACAGCAAGTATGGTGGCGGTGGTGAAATCTGCGTCAGAGGGAAAGGCGTACGCGAAGAACCAAGCTAATTTTCAGTCTCAAACTGTATACAGTCTAGCTCAGTGCACGCCGGATCTACGGCTTGAAGATTGCAGAAGTTGTTTGCGTGGTGTGATTGGGAACATTCCGTTGTGTAGTGAGGGGAAGATCGGAGGAAGAGCTGTGAATCCCAGCTGCAACATTCGCTATGAGATGTCGCCGGCACTGGCCAGGGCTCCGGCTCCGACGCCTAGACGGCATCATCATCCTCGACCTCCAGCAAGGACAATTGTGATAATTGTGGCTTCTCTTTTTGTTGGCGGGGCAATTTTTTATTCGGCTTACTATCTCTTAAAGATTCGAATGAAGAAGAGTCATAGGGCTATTCTCAGACAAAAGTACTTTGGAAGGGAAAGCACAACTTTAGAGCATCTGCAATTTAATCTGGCTACAATTGAGGCTGCGACAAATAAGTTTTCTCATGAAAATAGTTTAGGGAGAGGTGGATTTGGACAAGTTTTCAAGGGTGTTCTTTCAAATGGTCAAGAAATAGCTGTGAAGAGACTTTCAAAAAGTTCTGGTCAAGGTGCAGAAGAGTTTAAGAACGAGGTTTTATTAATAGCTAGACTCCAGCACAGATATTTGGTGGCGTTATTAGGATTTTGTATTGAGGAGCGAGAGAAAATCCTTGTTTATGAATATGTTCCCAACAGAAGCCTTGATTACTTTTTATTTGGTTCCCAAAACAACAGGGTATTAGATTGGATGGAGCGTAGTAAAATCATAGGAGGAGTTGCTCGAGGAATTCTTTATCTTCATGAATATTCTCGCTTGAAAATCATACATCGCGATCTCAAACCTAGCAATATTTTGTTGGATGATGAAATGAATCCAAAAATTTCAGATTTTGGCCTAGCTAAAATAGTTGCTATTAGTGAAAATGAAGGAAGTACAAATCGAGTTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAATTTTAGAAATTATTAGTGGAAAGAAGAACACGGGTTGCCATGATTCACAATATGCCGATGGCCTCTTAAGCTATACTTGGAAGCAATGGAGGGATGACAAGATGCTAGACATATTGGATTCAAATATAAATGAATTGGGATCATACAATGAAGTGATCAAGTGCATTCAAATTGGTTTATTATGTGTTCAAGAAAATCCGAATACAAGGCCCTCCATGGCTACAGTTGTTTCATATCTTAGCAATGATTCTATTCAATTGCCATCACCACAGGAACCTGCTTTCTTTTTGCATGGCCAACCAGAGCCTATTATCACCAGTGCGAGTGGAGAATCATGCTCTTTTTATGAAGCTTCTATAAGTGAATTCTTCCCTCGCTAA 2010 0.4264 MKVFASSHQTPIKNKPFFNLAMVTHRYFLLFFFFISSFLCSATIEALRPTYLYHNCSTAGKSFSANSTFQSHRTTLLSSLASANAAFYNTTVPGGSEAIYGLFMCRGDVSLQVCRECVANATQLLPSECRFSKEAVIWYDECMLRYSNTSFFSTIDKWPTVVILNPYNISNSHQARFKNFLLNFMNETASMVAVVKSASEGKAYAKNQANFQSQTVYSLAQCTPDLRLEDCRSCLRGVIGNIPLCSEGKIGGRAVNPSCNIRYEMSPALARAPAPTPRRHHHPRPPARTIVIIVASLFVGGAIFYSAYYLLKIRMKKSHRAILRQKYFGRESTTLEHLQFNLATIEAATNKFSHENSLGRGGFGQVFKGVLSNGQEIAVKRLSKSSGQGAEEFKNEVLLIARLQHRYLVALLGFCIEEREKILVYEYVPNRSLDYFLFGSQNNRVLDWMERSKIIGGVARGILYLHEYSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKIVAISENEGSTNRVVGTYGYMSPEYAMFGQYSEKSDVFSFGVIILEIISGKKNTGCHDSQYADGLLSYTWKQWRDDKMLDILDSNINELGSYNEVIKCIQIGLLCVQENPNTRPSMATVVSYLSNDSIQLPSPQEPAFFLHGQPEPIITSASGESCSFYEASISEFFPR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5805g00002 669 ProSiteProfiles Protein kinase domain profile. 352 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5805g00002 669 Gene3D - 161 267 IPR038408 -
Pral5805g00002 669 Gene3D - 48 151 IPR038408 -
Pral5805g00002 669 SMART serkin_6 352 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5805g00002 669 Pfam Protein kinase domain 353 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5805g00002 669 ProSiteProfiles Gnk2-homologous domain profile. 157 268 IPR002902 -
Pral5805g00002 669 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 49 150 - -
Pral5805g00002 669 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 313 427 - -
Pral5805g00002 669 CDD STKc_IRAK 358 623 - -
Pral5805g00002 669 Gene3D Phosphorylase Kinase; domain 1 313 427 - -
Pral5805g00002 669 SUPERFAMILY Protein kinase-like (PK-like) 335 651 IPR011009 -
Pral5805g00002 669 FunFam Cysteine-rich receptor-like protein kinase 10 159 267 - -
Pral5805g00002 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 68 650 - -
Pral5805g00002 669 FunFam cysteine-rich receptor-like protein kinase 10 428 630 - -
Pral5805g00002 669 Gene3D Transferase(Phosphotransferase) domain 1 428 631 - -
Pral5805g00002 669 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Pral5805g00002 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Pral5805g00002 669 Pfam Salt stress response/antifungal 56 148 IPR002902 -
Pral5805g00002 669 Pfam Salt stress response/antifungal 173 264 IPR002902 -
Pral5805g00002 669 ProSiteProfiles Gnk2-homologous domain profile. 51 151 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5805g00002 Pral-Chr5805 41537 46163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5805g00002 30 641 Receptor kinase-like Gene Family AT4G05200 45.126 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5805g00002 Pkinase 9.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5805g00002 - - pcin:129286093 811.216