Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5804g00018 ATGGGCAGTATTGAAGGTGACAAAGCAGGAGAAAATAACTTTACGGTGACGGTGACCAGGGAGGAGGTGGTAGCTGCCGTGTTGCCCTTGCAAGAGCATTGGCTTCCGCTCTCCAACCTCGACCTCCTTCTGCCGCCGCTGGACGTGGGAGTTTTCTTTTGCTACGATAAGCCGGCGGCCACCGGGACTGCGGTGGTCGGGGCTTTGAAGAAGGGCTTGGCTGAGGCTCTGGTTTCCTTCTACGCCTTTGCTGCCGAGGTGGTGACCAACTCCGCCGGCGAACCGGAGCTCCTCTGCAACAACCGTGGGGTTGATTTCGCGGAGGCTGAGGCTGACGTGGAGCTGAGAAGCCTCGACTTGTATAACCCTGATGATTCCATTGAAGGAAAGCTCGTTCCTCGGAAGAAAAACGGCGTGCTTGCTGTTCAGGCTACATTTCTGAAGTGTGGTGGGATTGTAGTGGCATGCTCTTTCGATCACCGCATTGCCGATGCATACTCCGCCAACATGTTCCTTGTCTCTTGGGCCCACTTGGCCCAGTCTTCCAAGCCCACCATCTCCACCCTCGACTCTCGACCATGTTTCCGCCGGTCTCTCCTCAGTCCACGGCGGCCTGGTGTCATTCATCCTTCCATCGACCGCATGTTTGTCCCGGTCTCCGAGCTGCCTCCTCCGAAGCAACCCAGTGCCGAATCCTTATCCGACCCCGTCATTAGTCGGATCTACTACATCCCTGCCGACCAACTGAACCATGTCCAGTCACTCGCGAACTCATCGGCCACAAACGTCGTCGGCGATGGCGTCAAGCGAACCAAACTCGAGTCTTTCTGCGCCTTCTTGTGGAGGATGGTTGCTGCAAGTGCCAACAGCAAAAGGGTCATCACCAAAATGGGAATTGTGGTGGACGGAAGGAGGAGGCTCAGCAATGGTCGTGACAAACAGAAGGCTTCTCTCATGGGATCGTATTTTGGAAACGTACTTTCGATACCATACGGCGAGAAGTCGGCAAGGGAGCTGACGGAGAAGTCGTTGAGTTGGGTGGCTGACGAAGTTCATGGGTTCTTGGAAGACGCGGTGACCGAGGAGCACTTCCTGGGCCTCGTAGACTGGGTGGAGGCTCACCGCCCTGGAGGTGCGGTGGCGAGTGTATATGTCGGCGGCGGAGAGGAGGGAGAAGAAGATGAGAGTTCAGCTTTTGTGGTTTCGTCGGGGCAGAGATTCCCAGAGGAGAAGGTGGATTTCGGGTGGGGGAGGCCGGTGTTTGGGTCGTACCACTTCCCGTGGGGCGGAGAGGCCGGGTTTGTGATGCCGATGCCGAGTCCGGTGGGGAAGGGCGACTGGGTGGTTTACATGCACCTTCGAAAAGGACAGTTGAAGAAGATAGAATCTGAAGCGGGTCAGGTGTTTAGGCCCTTGACTTGGGATTACCTTCTCCATTAA 1440 0.5639 MGSIEGDKAGENNFTVTVTREEVVAAVLPLQEHWLPLSNLDLLLPPLDVGVFFCYDKPAATGTAVVGALKKGLAEALVSFYAFAAEVVTNSAGEPELLCNNRGVDFAEAEADVELRSLDLYNPDDSIEGKLVPRKKNGVLAVQATFLKCGGIVVACSFDHRIADAYSANMFLVSWAHLAQSSKPTISTLDSRPCFRRSLLSPRRPGVIHPSIDRMFVPVSELPPPKQPSAESLSDPVISRIYYIPADQLNHVQSLANSSATNVVGDGVKRTKLESFCAFLWRMVAASANSKRVITKMGIVVDGRRRLSNGRDKQKASLMGSYFGNVLSIPYGEKSARELTEKSLSWVADEVHGFLEDAVTEEHFLGLVDWVEAHRPGGAVASVYVGGGEEGEEDESSAFVVSSGQRFPEEKVDFGWGRPVFGSYHFPWGGEAGFVMPMPSPVGKGDWVVYMHLRKGQLKKIESEAGQVFRPLTWDYLLH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5804g00018 479 Gene3D - 10 213 IPR023213 -
Pral5804g00018 479 Gene3D - 222 464 IPR023213 -
Pral5804g00018 479 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 29 440 - -
Pral5804g00018 479 Pfam Transferase family 15 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5804g00018 Pral-Chr5804 103670 105533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5804g00018 25 462 Monolignol Biosynthesis Gene Families AT5G48930 26.339 8.46e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5804g00018 - - qsu:111987067 597.816