Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5802g00001 ATGGATAATGAGGAGATTCCTTCAGCACCTACAACACCAGGGACTCCTGGTGGGCCTCTTTTTGGAGGTTTCAAGTCTGAGAGAAGTAATGGGAATGGCTATGTAAGGAAGAAATCACTTCTTAACAAATGTAAGTGTTTCAATGTTGAAGAATGGAATGTAGAAGAAGGAGCTTTGCCCACAGTCTCTTGTTCATTGCCACCCCCTCCTGTCCCTCTTGCAAGAAAGGTAGGAGCTGAGTTCATAGGCACTCTGATTCTAATGTTTGCTGGGACAGCCGCTGCTATAGTGAACCAGAAGACACAGGGCGCCGAGACTCTTATCGGCTGCGCCGCCACCACTGGTCTCGCCGTCATGATAGTCATCCTCTCCACCGGCCACATCTCCGGCGCTCATCTCAACCCCGCCGTCACTATCTCCTTTGCTGCACTAAAGCACTTCCCATGGAAACATGTTCCAGTGTACATCGGAGCTCAAGTACTGGCGTCAATATGTGCAGCATTTGCACTGAAGGGGATATTTCATCCCTTCATGAATGGAGGAGTCACTGTTCCTTCTGCAGGATATGGCGAAGCCTTTGCTTTGGAGTTCATCATCAGTTTCAACCTCATGTTCGTCGTCACCGCCGTAGCCACCGACACAAGAGCCGTTGGAGAACTTGCGGGAATCGCAGTGGGAGCCACGGTCATGCTCAACATCCTTATCGCAGGGCCAGCAACAGGAGGGTCAATGAACCCAGTGAGAACACTAGGGCCAGCAATAGCAGCAAATAACTACAGAGCCATTTGGGTATATCTCATAGCTCCCATTCTTGGAGCTCTCAGTGGAGCAGGCACTTACACTCTGGTGAAGCTCACTGATGAACAAGAAGAAGAGGCCAAGGTCACAACTTCTGCCCCTGGCAGCTTCAGAAGATGA 918 0.5033 MDNEEIPSAPTTPGTPGGPLFGGFKSERSNGNGYVRKKSLLNKCKCFNVEEWNVEEGALPTVSCSLPPPPVPLARKVGAEFIGTLILMFAGTAAAIVNQKTQGAETLIGCAATTGLAVMIVILSTGHISGAHLNPAVTISFAALKHFPWKHVPVYIGAQVLASICAAFALKGIFHPFMNGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIAANNYRAIWVYLIAPILGALSGAGTYTLVKLTDEQEEEAKVTTSAPGSFRR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5802g00001 305 Gene3D Glycerol uptake facilitator protein. 69 297 IPR023271 -
Pral5802g00001 305 CDD MIP 75 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5802g00001 305 PANTHER AQUAPORIN NIP2-1 43 289 IPR034294 -
Pral5802g00001 305 Pfam Major intrinsic protein 73 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5802g00001 305 SUPERFAMILY Aquaporin-like 72 289 IPR023271 -
Pral5802g00001 305 ProSitePatterns MIP family signature. 132 140 IPR022357 -
Pral5802g00001 305 MobiDBLite consensus disorder prediction 1 23 - -
Pral5802g00001 305 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5802g00001 305 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5802g00001 305 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5802g00001 305 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5802g00001 305 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5802g00001 305 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5802g00001 305 FunFam Aquaporin NIP2-1 63 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5802g00001 Pral-Chr5802 741 3401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5802g00001 1 305 Major Intrinsic Protein MIP AT1G80760 77.097 4.41e-168 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5802g00001 K09874 - gmx:100815637 462.225