Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5801g00089 ATGGAAGGTGACAAGACAACCCCAGCTCCATCAGATGGACTCACTGACGGTGTTCAGAAAATTAGGGCCCTGCATGGGCGGACTAGTGGCCCTACCAGGCGTTCTACAAAAGGACAATGGACACCGGAAGAGGATGAGATCTTGAGGAAGGCCGTACAACGCTTTAAAGGAAAGAATTGGAAGAAAATAGCGGAGTGTTTCAAGGATAGAACAGATGTACAATGTCTACATAGGTGGCAGAAAGTCTTAAATCCTGAACTGGTCAAAGGTCCATGGTCTAAAGAGGAAGACGAAATAATAATTGATTTGGTGAACAAATATGGGCCAAAAAAATGGTCTACTATTGCACAGCACTTACCTGGACGAATTGGTAAGCAATGCCGAGAAAGGTGGCATAATCATCTCAATCCCGCTATAAACAAAGAAGCATGGACTCAAGAAGAGGAGTTGGCTCTAATACGTGCGCATCAAATTTATGGGAACAGATGGGCCGAATTGACGAAGTTCTTGCCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGCTCTGTCAAAAAAAAATTGGATTCTTACTTGGCGTCAGGTATGCTTATACCCCATGTTGGACATCCAAATCAGCCCATGGTTTCTACATCTTCGAGGTTACTTTGTAGTGGAGATGACAGTGGTCAGAAGGGAATCGGAGAGGAAGTTTCAGAATGTAGCCAAGAGTCTGCTAGTGCTAGTCATCTACCGGTTTCCGGAGAAATGACAAGGGTTGTTTTACATGCTAGAGAAGAAACCAAGCCAAATGAATATTCTAGTCGAGGAAAGGAGCAAAGTCCTAGTCAAGCATCATGTTCAGAGCCATATTGCATACCACTGGATGATGTTACCCTGTCCAACTCAGACATTGCTCGTGAAGAGGCTTCCTCTTCTCGATTCACTGAGCAAAAATACTCACACGAGCCTGGAAATTCTGCAGGCATGGATAATAGATTCCAATTACATGGTTTACCCAGCATTTCATCATTAGACTTGGGTCAGGAATTCTCACTTTTGCAAGGAGATTGTATAGTTTCTGATGATAACCATGACATTGTGAATGCTCAATTTCATACTTCAATGGGGTTGGGTATGGCAACATCTATGGCTCCCACTTCTATGGATTCTTCTAAACCAGAGGACATGTTGATGGCTGATGAAGAATGTTGTAGAGTTCTTTTTTCTGATGCAATGAATGATGGAACCTTTTCATCCGGAGATCACAACAAAGTTAATGATGGCAGAGTATTGTACACTGGTGAAGCCGCACGAATATATGGAGTTGAGCACTTTGCCTCCAACGCACATGACAGCTTCATGTACCCCAACGATTCATCCATCTCACCTTGCATTGATATTATAGATAGTGCTGAAATGCACGATGGCCCCAATATTGTGAATGATGCATTAACATTGGTCCCTGTAAATAATTTCACCTGTGCATCGGATGCCATGCAAACTTGTAATCCAATGGATGAAAAGGCAGATGTGCAAACAGGGCAGGAGGACACGGGATCTCTATGTTATGAACCTCCTCGATTTCCGAGCTTGGATATTCCTTTCTTCAGCTGCGATCTTATACAACATGGAGGGGATATGCAGCAAGATTTCAGTCCACTGGGAATCCGCCGGCTTATGATGTCATCAGTGAACAGTCCAACTCCTTTGATGTTGTGGGATTCGCCTTCTCGTGATGATAGTCCAGATGCTTTGTTGAGAAGTGCTGCGAAAACTTTCACTAGCACCCCATCCATTTTAAAGAAGCGACGCCGGGACTTGTTATCACCATTATCAGATAAGAGAATCGAGAAGAAACTTGAGACTGACATGACATCCACGTTGACTACACGTTTTTCACATTTGGATGTAATGTTTGATGAAAATGAAGCTCAGGCTGCGAATATGCTTCCTCCGTCGTCAATACAGAAACATAAAAATGGAGCTTCTGATGATCATAAAGAAAATTGTGGGCCAGCTTTGAAAGGAGAGCATGTAGAGGGAAAAAAGGAATCTACCATTTTGAGGTGCAAAGAGTCAGAAAAAGATACCGGCAATAATAACTCTCAGGACGTTGATTCGAAGATGGAGACCGATCCTGATGCTGCTGCTGAGATTGGCCAACATCCTTCCGGAGTCTTAATCGAACATGATATGAATGACTTGCTATTGTATTCTCCAAATCAAATTCGTCTTGGCTCGGATAGAACTCACATTTCAAGTGCTAGAACTCCCAAAAGCCTGAGCAACAGAAGCTTAGAAGCAGCCCCAAATGAGAATATCGCTACGAAATCATTTAATGGAAATCCCTGCACAAGTGATTGCTCTCCTTCTGTTCGTGTAAAGGAGCACGAAATTTCTTCAGTTCGACCATCTCACTGTTCATCTGCCCCTGCGGAGAATTCTGGTGATCATGCTGGGAATGATGCTGGTTTTGAATCATTCAGCATATTTGGAGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCAGCATGGAAGTCCCCTTGGTTCATTAACACTTTTCTGACTAGCCCCAGAATTGATGCTGAAATTACGATTGAGGATTTTGGGTATTTAATGAGCCCGGGTGATAGAAACTATGATGCAATTGGGTGGATGAAGCAGGTCAAGGAACAAACTGCGGCTGCATATGCCGATGCTGAGGAGATTTTGGAAATCGACACTCCAAAAGCAAAAGATGCATCTGGAAAAGCGGGGGATGGGGGCCAGGAAAGAGGAGATCCTCGTAATCAGCCAGGCGATCATTGTCAGTTAGCTTCTACAAATGCTTTGATGGAGCGACGGGTACTTGACTTCAGTGAGTGTGGATCACCAGGAAAGGAGAACAGCAAATCTTCAGCTGTGACCTTCTCAAGCTCCTCGTCATATTTATTGAAAGGGTGCAGATAG 2940 0.4361 MEGDKTTPAPSDGLTDGVQKIRALHGRTSGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGMLIPHVGHPNQPMVSTSSRLLCSGDDSGQKGIGEEVSECSQESASASHLPVSGEMTRVVLHAREETKPNEYSSRGKEQSPSQASCSEPYCIPLDDVTLSNSDIAREEASSSRFTEQKYSHEPGNSAGMDNRFQLHGLPSISSLDLGQEFSLLQGDCIVSDDNHDIVNAQFHTSMGLGMATSMAPTSMDSSKPEDMLMADEECCRVLFSDAMNDGTFSSGDHNKVNDGRVLYTGEAARIYGVEHFASNAHDSFMYPNDSSISPCIDIIDSAEMHDGPNIVNDALTLVPVNNFTCASDAMQTCNPMDEKADVQTGQEDTGSLCYEPPRFPSLDIPFFSCDLIQHGGDMQQDFSPLGIRRLMMSSVNSPTPLMLWDSPSRDDSPDALLRSAAKTFTSTPSILKKRRRDLLSPLSDKRIEKKLETDMTSTLTTRFSHLDVMFDENEAQAANMLPPSSIQKHKNGASDDHKENCGPALKGEHVEGKKESTILRCKESEKDTGNNNSQDVDSKMETDPDAAAEIGQHPSGVLIEHDMNDLLLYSPNQIRLGSDRTHISSARTPKSLSNRSLEAAPNENIATKSFNGNPCTSDCSPSVRVKEHEISSVRPSHCSSAPAENSGDHAGNDAGFESFSIFGGTPFRRSIESPSAWKSPWFINTFLTSPRIDAEITIEDFGYLMSPGDRNYDAIGWMKQVKEQTAAAYADAEEILEIDTPKAKDASGKAGDGGQERGDPRNQPGDHCQLASTNALMERRVLDFSECGSPGKENSKSSAVTFSSSSSYLLKGCR 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5801g00089 979 CDD SANT 91 135 IPR001005 -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 655 710 - -
Pral5801g00089 979 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Pral5801g00089 979 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Pral5801g00089 979 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Pral5801g00089 979 Gene3D - 142 198 - -
Pral5801g00089 979 FunFam Transcriptional activator Myb isoform A 89 141 - -
Pral5801g00089 979 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Pral5801g00089 979 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Pral5801g00089 979 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Pral5801g00089 979 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Pral5801g00089 979 PANTHER MYB PROTEIN-RELATED 37 110 - -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 952 979 - -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 1 42 - -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 652 710 - -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 955 979 - -
Pral5801g00089 979 FunFam Transcription factor MYB3R-2 142 207 - -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 301 323 - -
Pral5801g00089 979 CDD SANT 40 83 IPR001005 -
Pral5801g00089 979 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Pral5801g00089 979 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 798 817 - -
Pral5801g00089 979 FunFam Transcriptional activator Myb isoform A 36 88 - -
Pral5801g00089 979 Coils Coil 979 979 - -
Pral5801g00089 979 SMART sant 140 188 IPR001005 -
Pral5801g00089 979 SMART sant 36 85 IPR001005 -
Pral5801g00089 979 SMART sant 88 137 IPR001005 -
Pral5801g00089 979 CDD SANT 143 183 IPR001005 -
Pral5801g00089 979 Gene3D - 36 88 - -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 261 283 - -
Pral5801g00089 979 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 904 933 - -
Pral5801g00089 979 Gene3D - 89 140 - -
Pral5801g00089 979 MobiDBLite consensus disorder prediction 904 928 - -
Pral5801g00089 979 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5801g00089 Pral-Chr5801 446267 452799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5801g00089 9 979 MYB Transcription Factor Family AT4G32730 43.292 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5801g00089 Myb_DNA-binding 2.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5801g00089 - K09420 gmx:100811335 1222.22