Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5801g00085 ATGGAAAGTGACAGGACAACTCATGCTTCATCCGACGGGCTCAGTGATGGTGCCCAGAAAATAAGAGCACTGCATGGGCGGACTACTGGCCCTACAAGGCGTTCTACCAAAGGACAGTGGACGCCTGAAGAGGATGAGATTTTGCGGATGGCTGTTCAGCGTTTTAAAGGAAAGAACTGGAAAAAAATAGCGGAATGCTTTAAGGATAGAACAGATGTACAATGCCTTCATAGGTGGCAAAAAGTCTTGAATCCTGAACTGGTCAAAGGTCCATGGTCCAAAGAGGAAGATGAAATCATAATTGATTTAGTGAATAAATATGGGCCAAAAAAGTGGTCAACCATCGCACGGCACCTACCTGGACGCATCGGTAAACAATGCCGAGAAAGGTGGCATAATCATCTTAATCCTGCTATAAACAAGGAAGCGTGGACTTATGAAGAGGAGCTGGCTCTAGTACGTGCTCATCAGATTTATGGGAACAGATGGGCAGAATTGACAAAGTTCTTGCCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGCTCAGTAAAAAAGAAATTGGATTCATACTTGGCATCAGGTTTGCTTGCTCAATTCCAAGATGTACCCCTTGTTGGACAGTCAAATCAACCGGTAGTTTCTACCTCTTTGAGGCGGCAGTGTAGCGGAGATGATAATGGTTATAAGGGCCCTGAAGGAGAGGAAGTTTCTGAGTGTAGCCAAGAGTCAGCCAATGTTAGTTGCTTCCCATCTGCTAGAGATATGACCAATGTTGTATTAAATACTACAGAGGAACTAAAGCCAGGTGAAGATATCAGTCTGGGAAAGGAGCACAGTCCTAGTCAGGCATCTTGTCTAGAGCCATATTGCATATCTCTGGATGACGTCACAATATCCATTCCGGACGTTGCTCATGAAGATGCTTCTTGTTCTGATTTCATTGAGCAAACATACTCACATGATCCTGGAAATTCTGCAAGCAGGGATGCTCAGTTTACTTTTCATGCCGTCCCTAACATTTCTTCATCAGACTTGGATCAAGAATGTTCACTTCTGCGAAGGGACAGCGCGGATTGCGTTGAAAGCCATAATATTGCAAGTGTTCCATTGCATACGTCAGTGGGATCAGGTATTTCAACATCCATGGGACCCCCGTCTATGGATCCTGCGAAGCAAGACCACTTGTTATTATCTAATGAAGAATGTTATAGAGTCCTATATTCAGAGGCAATAAATGATGGGTGCTTTTCTTCGGAAGATTATAACCAAAATGTTAATACAGTTTCATCCGGATGCATTTCATTATTTGGCCAATCATCTGACCTCCATATACCTGAGACGGGCGGCACCTCGACTTCATTCCAGACTTGTCCCGTAAAATCTAATGATTTAATAGGATCTTCATGCTCTCAATGTCCGGTGCTTTCTGCTAATGACGGTAGATTAGTGTATACAGCTGAAGCCAACCATCTATTTGGAGTTGATGATCTGCCATTCGTCTCCAGAGCTCAGGATAGCTTCATTTATATTAACAACTCATCCATTGCTCCCTGTACGGATGCTATAAATAGTGGAGAAATACACAAGGGACAAGATACTGTGAATGATGCTTCAAGATTGGTGCCTGTAAATACATTTTGCAGCGCATCAGATGCCAAACGCACTTTTTGTCCAATGGAAGAAAGGACAGATGTGCAATTAGAACAATTAGAGACCGGAGCTCTATGCTATGAACCGCCTCGATTCCCAAGTTTGGATATTCCTTTCTTAAGCTGTGATCTTATACAATCAGGAGGGGATATGCAACAAGAATTTAGTCCACTGGGTATCCGCCGGCTTATGATGTCATCTATGAACTGTCCAACTCCCCTGAGGCTGTGGGAGTCACCTTGTCGTGATGATAGCCCCGATGCTTTGTTGAAAAGTGCTGCTAAAAGTTTCACAGGTACACCGTCCATATTAAAGAAACGACACCGAGACTTGTTGTCGCCTCTATCGGATAAGAGAATCGACAAGAAACTTGAAACTGACTTGACGTCCACGTTGGCTACGCATTTTTCACGTTTGGAAGTCATGTTTGATGATAATGAGACTCAGGAAGCAGATATGATTTCTCAGCCTTTAATGGAGAAAGAGAAATATGGAGCAACTGTTGAGGATACCGAAAATCATGGACAATCTTTGAAAGGAGAACATGCAGAGGGAAGAAATGAATCTACACTAAGCAACAAAAGGTCAGAAAAAGAGACAGCTGACAGCGATCCTCAGGATTTCCAGCGACCTTCTTACGATGATTCGAAGGTGAAGGTTGATTGTGACGTTGATAGGGCTGCTGAGAATGTGCGACAACCTTCTGGAGTCTTAGCTGAACATGATATAAATGATTTGCTACTATATTCTCCTAATCAAATGTGTTTTAAACCGGACAGAACTCAATGTTCAAGTGCTAAAACTCCCAAAAACCTGAACGACAGAGGTTTGGAAGCATCTTTAAATAAGAGCATTTCTTCAAATCCATGCTCAAGCGATAGCTCCCCTTCTGGTCGTGTAAAAAATCATGACGTTTCTTCATTTTCGGTTACTTGTGCATCATCTCTTTGTTCATCAGTACCTGCCGAGACTCTTGGTGATCATCCTGGACATGATGCTGGTTTTGACCCTTTTAGCATATTTGGCGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCTGCATGGAAGTCTCCCTGGTTCATGAACACTTTCTTGCCTAGCCCCAGACTTAATGCTGAAATAACAATCGAGGTACGTCAAGTACCGTCGGGTGTCTGA 2820 0.4309 MESDRTTHASSDGLSDGAQKIRALHGRTTGPTRRSTKGQWTPEEDEILRMAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIARHLPGRIGKQCRERWHNHLNPAINKEAWTYEEELALVRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLAQFQDVPLVGQSNQPVVSTSLRRQCSGDDNGYKGPEGEEVSECSQESANVSCFPSARDMTNVVLNTTEELKPGEDISLGKEHSPSQASCLEPYCISLDDVTISIPDVAHEDASCSDFIEQTYSHDPGNSASRDAQFTFHAVPNISSSDLDQECSLLRRDSADCVESHNIASVPLHTSVGSGISTSMGPPSMDPAKQDHLLLSNEECYRVLYSEAINDGCFSSEDYNQNVNTVSSGCISLFGQSSDLHIPETGGTSTSFQTCPVKSNDLIGSSCSQCPVLSANDGRLVYTAEANHLFGVDDLPFVSRAQDSFIYINNSSIAPCTDAINSGEIHKGQDTVNDASRLVPVNTFCSASDAKRTFCPMEERTDVQLEQLETGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRRLMMSSMNCPTPLRLWESPCRDDSPDALLKSAAKSFTGTPSILKKRHRDLLSPLSDKRIDKKLETDLTSTLATHFSRLEVMFDDNETQEADMISQPLMEKEKYGATVEDTENHGQSLKGEHAEGRNESTLSNKRSEKETADSDPQDFQRPSYDDSKVKVDCDVDRAAENVRQPSGVLAEHDINDLLLYSPNQMCFKPDRTQCSSAKTPKNLNDRGLEASLNKSISSNPCSSDSSPSGRVKNHDVSSFSVTCASSLCSSVPAETLGDHPGHDAGFDPFSIFGGTPFRRSIESPSAWKSPWFMNTFLPSPRLNAEITIEVRQVPSGV 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5801g00085 939 CDD SANT 91 135 IPR001005 -
Pral5801g00085 939 FunFam Transcriptional activator Myb isoform A 36 88 - -
Pral5801g00085 939 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Pral5801g00085 939 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Pral5801g00085 939 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Pral5801g00085 939 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Pral5801g00085 939 PANTHER MYB PROTEIN-RELATED 37 122 - -
Pral5801g00085 939 CDD SANT 40 83 IPR001005 -
Pral5801g00085 939 MobiDBLite consensus disorder prediction 1 41 - -
Pral5801g00085 939 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Pral5801g00085 939 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Pral5801g00085 939 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Pral5801g00085 939 MobiDBLite consensus disorder prediction 717 769 - -
Pral5801g00085 939 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Pral5801g00085 939 SMART sant 140 188 IPR001005 -
Pral5801g00085 939 SMART sant 88 137 IPR001005 -
Pral5801g00085 939 SMART sant 36 85 IPR001005 -
Pral5801g00085 939 Gene3D - 89 140 - -
Pral5801g00085 939 Gene3D - 142 201 - -
Pral5801g00085 939 CDD SANT 143 183 IPR001005 -
Pral5801g00085 939 Gene3D - 36 88 - -
Pral5801g00085 939 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Pral5801g00085 939 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Pral5801g00085 939 FunFam Transcriptional activator Myb isoform A 89 141 - -
Pral5801g00085 939 MobiDBLite consensus disorder prediction 834 854 - -
Pral5801g00085 939 FunFam Transcription factor MYB3R-2 142 204 - -
Pral5801g00085 939 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5801g00085 Pral-Chr5801 437207 442797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5801g00085 21 931 MYB Transcription Factor Family AT4G32730 43.027 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5801g00085 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5801g00085 - K09420 qsa:O6P43_015528 1112.06