Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5801g00062 ATGGAAGGAAGTGGGACGAAGGAGGAAACCCTACCTCCTGGGTTCCGATTTCATCCCACAGATGAAGAACTCATCACTAGCTATCTCATCAACAAGATCTCTGATTCTTCCTTTACTGCAAGAGCCGTCACTGATGTCGATCTCAACAAATGCGAGCCATGGGAACTCCCTGGGAAGGCGAAGATGGGAGAGAAAGAGTGGTACTTCTTCAGTCTGAGAGATCGGAAATACCCGACGGGCGTGAGAACCAACAGGGCGACCAACACAGGCTACTGGAAGACCACCGGAAAAGACAAGGAAATCCTTAACAGTGCTACATCGGAGTTGGTCGGCATGAAAAAGACTCTGGTTTTCTACAAAGGAAGAGCCCCCAGAGGTGAGAAAACCAACTGGGTCATGCACGAATATCGTATCCACTCAAAATCCTCCTTCAGACTACATAACAAGCAGGACGAATGGGTGGTTTGCAGAGTTTTCCAGAAGAGCGGTGGAGCCAAAAAGTACCCTTCCAATCACACAAGAGGAGTGAATCCATACAGCCTGGACATAGCTCCTAACATTATGGGACCTTCCATGATGCATGTGGCGGATCCTAATTCTGCTCACTTCCTCTACGGAAGGAACTATGTCAACAGTGCTTCTGACATTGCAGAGGTTGCCAGGGTTTTGAGAGCAGGAGGAGGGGCTGCTGCTACCGCTGCTCTCAACCTTCCAATGCAATCCCATGCCCAGTTCAATTATCCTCCGGCAGCTGCAGCAGGAGGATTTACGATTTCCGGCCTCAACTTGAATCTCGCCGGAGGAGGAGGAGGAGGAACCACCGGGCTACCTGTTTTCCGGCCGATGAACCCCCATGATGCGGGCTCCAACATGATGACAGCAGGGAGTGCTCTCAATGGAGCAGATCATGTGGGGTACGGTGCTGCAGAAATGAGCAACCCTAATAACATTGGTCCAAGCAACAGGTTCATTGGGATGGACCATTGTGTGGATTTAGATAACTACTGGCCTTCCTACTAA 1020 0.5029 MEGSGTKEETLPPGFRFHPTDEELITSYLINKISDSSFTARAVTDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSFRLHNKQDEWVVCRVFQKSGGAKKYPSNHTRGVNPYSLDIAPNIMGPSMMHVADPNSAHFLYGRNYVNSASDIAEVARVLRAGGGAAATAALNLPMQSHAQFNYPPAAAAGGFTISGLNLNLAGGGGGGTTGLPVFRPMNPHDAGSNMMTAGSALNGADHVGYGAAEMSNPNNIGPSNRFIGMDHCVDLDNYWPSY 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5801g00062 339 ProSiteProfiles NAC domain profile. 11 161 IPR003441 GO:0003677|GO:0006355
Pral5801g00062 339 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Pral5801g00062 339 SUPERFAMILY NAC domain 8 161 IPR036093 GO:0003677|GO:0006355
Pral5801g00062 339 Gene3D NAC domain 20 164 IPR036093 GO:0003677|GO:0006355
Pral5801g00062 339 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 186 - -
Pral5801g00062 339 FunFam NAC domain-containing protein 100-like 20 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5801g00062 Pral-Chr5801 311949 314251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5801g00062 7 339 NAC Transcription Factor Family AT2G24430 50.562 1.47e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5801g00062 NAM 2.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5801g00062 - - gmx:100804931 461.07