Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5801g00061 ATGAAAGATCAAGACAGTAATTATAAAGCATCAAGACCCCATTTGAACAAGAGTTTCCACTCCATGCAAAAGAAAGAGAAGGAAGCAAGGAAAGAAGGGAGGGATAAGGAAATGGAAGGAAGTGGGACGAAGGAGGAAACCCTACCTCCTGGGTTCCGATTTCATCCCACAGATGAAGAACTCATCACTAGCTATCTCATCAACAAGATCTCTGATTCTTCCTTTACTGCAAGAGCCGTCACTGATGTCGATCTCAACAAATGCGAGCCATGGGAACTCCCTGGGAAGGCGAAGATGGGAGAGAAAGAGTGGTACTTCTTCAGTCTGAGAGATCGGAAATACCCGACGGGCGTGAGAACCAACAGGGCGACCAACACAGGCTACTGGAAGACCACCGGAAAAGACAAGGAAATCCTTAACAGTGCTACATCGGAGTTGGTCGGCATGAAAAAGACTCTGGTTTTCTACAAAGGAAGAGCCCCCAGAGGTGAGAAAACCAACTGGGTCATGCACGAATATCGTATCCACTCAAAATCCTCCTTCAGACTACATAACAAGCAGGACGAATGGGTGGTTTGCAGAGTTTTCCAGAAGAGCGGTGGAGCCAAAAAGTACCCTTCCAATCACACAAGAGGAGTGAATCCATACAGCCTGGACATAGCTCCTAACATTATGGGACCTTCCATGATGCATGTGGCGGATCCTAATTCTGCTCACTTCCTCTACGGAAGGAACTATGTCAACAGTGCTTCTGACATTGCAGAGGTTGCCAGGGTTTTGAGAGCAGGAGGAGGGGCTGCTGCTACCGCTGCTCTCAACCTTCCAATGCAATCCCATGCCCAGTTCAATTATCCTCCGGCAGCTGCAGCAGGAGGATTTACGATTTCCGGCCTCAACTTGAATCTCGCCGGAGGAGGAGGAGGAGGAACCACCGGGCTACCTGTTTTCCGGCCGATGAACCCCCATGATGCGGGCTCCAACATGATGACAGCAGGGAGTGCTCTCAATGGAGCAGATCATGTGGGGTACGGTGCTGCAGAAATGAGCAACCCTAATAACATTGGTCCAAGCAACAGGTTCATTGGGATGGACCATTGTGTGGATTTAGATAACTACTGGCCTTCCTACTAA 1131 0.4916 MKDQDSNYKASRPHLNKSFHSMQKKEKEARKEGRDKEMEGSGTKEETLPPGFRFHPTDEELITSYLINKISDSSFTARAVTDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSFRLHNKQDEWVVCRVFQKSGGAKKYPSNHTRGVNPYSLDIAPNIMGPSMMHVADPNSAHFLYGRNYVNSASDIAEVARVLRAGGGAAATAALNLPMQSHAQFNYPPAAAAGGFTISGLNLNLAGGGGGGTTGLPVFRPMNPHDAGSNMMTAGSALNGADHVGYGAAEMSNPNNIGPSNRFIGMDHCVDLDNYWPSY 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5801g00061 376 FunFam NAC domain-containing protein 100-like 57 202 - -
Pral5801g00061 376 SUPERFAMILY NAC domain 44 198 IPR036093 GO:0003677|GO:0006355
Pral5801g00061 376 MobiDBLite consensus disorder prediction 1 54 - -
Pral5801g00061 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 45 221 - -
Pral5801g00061 376 MobiDBLite consensus disorder prediction 19 43 - -
Pral5801g00061 376 ProSiteProfiles NAC domain profile. 48 198 IPR003441 GO:0003677|GO:0006355
Pral5801g00061 376 Gene3D NAC domain 57 201 IPR036093 GO:0003677|GO:0006355
Pral5801g00061 376 Pfam No apical meristem (NAM) protein 49 175 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5801g00061 Pral-Chr5801 311949 314251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5801g00061 44 376 NAC Transcription Factor Family AT2G24430 50.562 2.43e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5801g00061 NAM 3.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5801g00061 - - gmx:100804931 469.159