Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5801g00057 ATGGAGCCCTGCCCTTCGATTCAATCAGTTACTGCGTCGTCCATCTACCCCGCCGACGGCGGCTTCCCACGCATCACGTCGGAGTGGGATGCGGAAGAGTTCATGGCGTTGGTGTCGGAAATGACGAACGGATCCGTGATCGATGAGGACGTGAAATCGGGCGAGTTCATGTGTCAGAGTGTCAACAGAGGTTTCGCCGGCGGTGAGGATGCATACTTCAACGGCGTCAGCCTCGATGAGCTTCAGGCCGCTTTGGAAACTGATGTGAGTGAATTTTCAGCTTCAGGAGAACTAGACGATAACAATATTGCCTGGGCCCAAAACATCACTCCCAGTCGTTCTCCCATTTCCTGTATCACCGAGTCTCCCTCATCGATTTGTGGTAATCAAGCAAGAGGAGCATCAAGCGGTGAGCAGTCTGACGAGGATGATGAAACAGGTCCCTGCGAGCAGATCATAGATCCCACTGATAAGCGCGACAGAAGGAAGAAATCTAATCGGGAGTCTGCAAGAAGATCGAGAAGAAGAAAACAAGCGCACATGGCTGACCTTGAGACGCAGGTTGAGCAACTGAGGGTGGAAAATTCAAATCTATCCAAGCAGCTTATAGATGCTGACCAACATTTTCGTGAGGCTAATACTGATAACCGAGTGCTGAAATCAGGTGTGGAAGCGTTGAGAGCCAAGGTGAAGTTGGCAGAAGACATCGTGGCTCGTGGCTCTTTAACCACCTTAAACAACCAGCTTCTTCAGACTCCAAGTCAGCACCTGAACCCACACAATAATCTGCGCAGATCAGCGGCCCACGTGTCTCCATCCATTCCAGTCCAGGGAAACGATGCCTCGTCATATACTGCCTCCATGACGGTTGGTGCTCAGAATCCTGGTCTTTCACTTGAGAACTTAAATATCACCACTAACAGTTTCAATCCCTGGAATCTCAAGTGA 948 0.5032 MEPCPSIQSVTASSIYPADGGFPRITSEWDAEEFMALVSEMTNGSVIDEDVKSGEFMCQSVNRGFAGGEDAYFNGVSLDELQAALETDVSEFSASGELDDNNIAWAQNITPSRSPISCITESPSSICGNQARGASSGEQSDEDDETGPCEQIIDPTDKRDRRKKSNRESARRSRRRKQAHMADLETQVEQLRVENSNLSKQLIDADQHFREANTDNRVLKSGVEALRAKVKLAEDIVARGSLTTLNNQLLQTPSQHLNPHNNLRRSAAHVSPSIPVQGNDASSYTASMTVGAQNPGLSLENLNITTNSFNPWNLK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5801g00057 315 MobiDBLite consensus disorder prediction 113 183 - -
Pral5801g00057 315 Gene3D - 157 213 - -
Pral5801g00057 315 MobiDBLite consensus disorder prediction 113 136 - -
Pral5801g00057 315 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 161 176 IPR004827 GO:0003700|GO:0006355
Pral5801g00057 315 Pfam bZIP transcription factor 156 202 IPR004827 GO:0003700|GO:0006355
Pral5801g00057 315 CDD bZIP_plant_GBF1 172 210 IPR045314 GO:0003700|GO:0006355
Pral5801g00057 315 FunFam BZIP transcription factor 156 207 - -
Pral5801g00057 315 PANTHER BASIC LEUCINE ZIPPER 63 108 300 - -
Pral5801g00057 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 156 202 IPR004827 GO:0003700|GO:0006355
Pral5801g00057 315 SUPERFAMILY Leucine zipper domain 158 202 IPR046347 GO:0003700|GO:0006355
Pral5801g00057 315 Coils Coil 167 208 - -
Pral5801g00057 315 SMART brlzneu 154 218 IPR004827 GO:0003700|GO:0006355
Pral5801g00057 315 Pfam Basic leucine-zipper C terminal 225 288 IPR020983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5801g00057 Pral-Chr5801 297901 301463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5801g00057 97 297 bZIP Transcription Factor Family AT5G24800 48.444 5.39e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5801g00057 bZIP_C 3.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5801g00057 K25784 - qsa:O6P43_019320 211.075