Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5801g00047 ATGTCTATGGAACCAAAGAAGTCCAACAAGATCACAGAAATTGTTAGGCTTCGGCAGATCCTCAAGAAATGGAGAAGGGCGGCCAGCTCTTCAAAAACCACCACCACCACCACTAGCAGCAGCAGTAAAAGTATCAAGTTTCTGAAAAGGACGCTTTCTTTATCCGAACGTGAAGGAGGATCAAACAATTTTGTTCCCAAGGGATATCTGGCTGTCTGTGTTGGGGAAGAGCTGAAGAGGTTCATTATACCCACTGAGTATTTGGGTCATCAGGCCTTTCACATGTTATTGAGGGAAGCAGAAGAAGAATTTGGGTTTCAACAGACCGGTGTCCTGAGGATCCCTTGTGAAGTATCTGCCTTCGAGAGCATATTAAAGAGGATGGAGGGAAAGAAGGACAAGGTTTCCACTCAAGTTTTCCACTCAACAGACAGGTGCTCTGAGGACTTGCTTACTTGTTCCCACCGTCCTCACAGTCCAATGTGCAGATAG 492 0.4593 MSMEPKKSNKITEIVRLRQILKKWRRAASSSKTTTTTTSSSSKSIKFLKRTLSLSEREGGSNNFVPKGYLAVCVGEELKRFIIPTEYLGHQAFHMLLREAEEEFGFQQTGVLRIPCEVSAFESILKRMEGKKDKVSTQVFHSTDRCSEDLLTCSHRPHSPMCR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5801g00047 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 124 IPR003676 GO:0009733
Pral5801g00047 163 Pfam Auxin responsive protein 22 127 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5801g00047 Pral-Chr5801 265324 266177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5801g00047 3 163 Calmodulin-binding Proteins AT2G24400 55.556 5.25e-57 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5801g00047 K14488 - gmx:100779842 216.853