Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5801g00021 ATGGCGGTGGAGCTCATGGGGTTTCCGAAAATGGACGAGCAGAAAGCAATTCAGGAGGCTGCATCGGAGGGATTAAAGGGCATGGAGAATCTAATCCGTGTTCTGTCCCACAAACCCGATCTCGTTGACTGCGCTGATCTTACCGATGTTACTGTTTCTAAGTTTAAGAAAGTCATTTCTCTTCTAAATCGCACTGGCCATGCCCGGTTCAGAAGAGCACCGATTCCCCCTTCCAGCTCGCCTCCCCCTTCTGCTTCAAAGTTGCCGCCGCCATCGTCCGCCGTGCCCTCGTCGGCCAACATTTCCCAATCGCAAATTCCGAATCTATCACCGGCGCAGTTCCCCTCTCCGGCGCCCATCCCAAATCCGGTCACCTTGCATAACGCTCCGATCAACAACAGCACTGCTCCATCCGGTTTTGTTCCGGCTCATTCACAGTCTCTGACTCTCGATTTCACAAAACCTAATATATTGACCTCCAAGACGAAGTCCCTAGAGCTGGAGTTCTCGAAGGAAACCTTCAGCGTGTCTTCAAACTCATCTTTCATGTCGTCGGCCATCACCGGCGACGGCAGCGTATCGAACGGCAAACAAGGAACGTCGATCTTCCTTGCACCAGCAGCACCAACTGCCTCCGGCAACGGGAAGCCACCCCTATCGACGGTACCGACGAAGAAGAGATGCCACGACCACCGTGAGCACTCCGATGACCTCTCCGGCTCCAGCAAGTGCCACTGCACAAAAAGAAGGAAGAATCGGCTGAAGAAGGTTGTAAGAGTGCCGGCGATTAGCTCAAAGATCGCGGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGCCAGAAACCGATCAAGGGATCACCGTATCCAAGGGGTTATTACAAATGCAGTACAGTGAGAGGGTGTCCGGCGAGGAAACACGTAGAGCGGGCCCCGGATGATCCGGCGATGCTGATCGTAACCTACGAGGGGGAGCACCGTCACGCATTGCAGGCCGCGATGCAGGAGAACGGATCCGGGGGTGTTGGGCTGGTGTTTCAGTCTACATGA 1053 0.547 MAVELMGFPKMDEQKAIQEAASEGLKGMENLIRVLSHKPDLVDCADLTDVTVSKFKKVISLLNRTGHARFRRAPIPPSSSPPPSASKLPPPSSAVPSSANISQSQIPNLSPAQFPSPAPIPNPVTLHNAPINNSTAPSGFVPAHSQSLTLDFTKPNILTSKTKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGTSIFLAPAAPTASGNGKPPLSTVPTKKRCHDHREHSDDLSGSSKCHCTKRRKNRLKKVVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHALQAAMQENGSGGVGLVFQST 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5801g00021 350 MobiDBLite consensus disorder prediction 126 140 - -
Pral5801g00021 350 Pfam WRKY DNA -binding domain 273 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5801g00021 350 MobiDBLite consensus disorder prediction 75 90 - -
Pral5801g00021 350 MobiDBLite consensus disorder prediction 91 111 - -
Pral5801g00021 350 FunFam WRKY transcription factor 65 255 332 - -
Pral5801g00021 350 MobiDBLite consensus disorder prediction 207 244 - -
Pral5801g00021 350 Pfam Plant zinc cluster domain 225 269 IPR018872 -
Pral5801g00021 350 Gene3D WRKY domain 255 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5801g00021 350 SUPERFAMILY WRKY DNA-binding domain 269 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5801g00021 350 ProSiteProfiles WRKY domain profile. 266 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5801g00021 350 MobiDBLite consensus disorder prediction 70 140 - -
Pral5801g00021 350 MobiDBLite consensus disorder prediction 223 244 - -
Pral5801g00021 350 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 335 IPR044810 GO:0003700
Pral5801g00021 350 SMART WRKY_cls 271 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5801g00021 Pral-Chr5801 119439 121274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5801g00021 1 349 WRKY Transcription Factor Family AT2G24570 58.611 8.48e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5801g00021 WRKY 9.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5801g00021 - - tcc:18587637 437.958