Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5801g00020 ATGGCTGATTCAGTGCATGCTAGCAGCGATAGTAAAATTCAGAATTTGATTTCCGCTAAGAAGTCATTGAAGCTTAGCCTGGAGAAGTCAAAGTCCCTAGGGTTAGCTTTGGAGAAGGCTGGACCTAGATTGGAGGAGATTAGCCAAAGATTGCCTTCCCTTGAATCTGCTGTTCGCCCCATTCGTGCTGACAAGGACGCCCTTGCGGCTGTTGGCGGACACATTAATCGAGCCGTTAGCCCCGCAGCTGCCGTGCTCAAGGTTTTTGATGCTGTACATGGCCTCGAAAAGTCACTGTTATCTGATCCGCGTAATGATCTCCCGGGTTATTTGTCAGTGGTGAAGCGCCTCGAAGAGGCACTGAGGTTCTTGGCAGATAACTGTGGATTGGCAATTCAATGGTTGGAGGATATTGTGGAGTACTTGGAAGATAATACTGTTGCTGATGAAAGGTATCTGTCAAATTTGAAGAAGTCACTTCAAAATCTTCGTGAATTGCAAAATGAAGAGGGGAAGGCCCGACTGGATGGTGGGCTTTTAGAAGCAGCATTGCAAAAACTGGAAAATGAATTCCGGCAGCTGTTGACTGAAAACAGTGTTCCGCTTCCAATGTCACCATCGCCTACGCTTGCTGGTCAGGCATGCATTGCTCCTTCACCTTTACCAGTATCTATTATTCACAAGTTGCAAGCAATTCTTGGCAGATTGATCGCTAACAATAGACTCGAGAAATGCATATCAATTTATGTTGAAGTCCGTAGTTCAAACGTCAGAGCAAGCCTGCAGGCTCTCAATCTGGATTACCTTGAGATCTCAGTATCTGAATTCAATGATGTGCAGAGCATTGAGGGATATATAGCCCAATGGGGAAAGCATTTAGAGTTTGCAGTGAAGCATTTGTTTGAAGCTGAGTATAAACTTTGTAATGATGTATTTGAGAGGATTGGATTGGATGTGTGGATGGGCTGCTTTTCAAGGATAGCTGCACAGGCCGGTATACTTGCATTTCTTCAATTTGGGAAGACTGTTACAGAGAGTAAGAAAGATCCCATCAAACTGTTAAAACTATTGGACATATTTGCATCTCTGAACAAATTGAGATTGGATTTCAACCGCCTTTTTGGTGGAGCAGCATGTGTTGAAATTCAGAACTTGACTAGGGATCTAATCAAGAGTGTGATTGATGGGGCAGCGGAGATTTTCTGGGAACTTCTGGTCCAGGTAGAGTTACAGAGACAGAATCCACCTCCTCTTGACGGCAATGTCCCGAGACTGGTGAGTTTTATTACTGATTATTGTAACAAACTCCTAGGGGATGACTATAAGCCAATATTGACACAAGTCCTTGTCATACACCGGAGTTGGAAACGGCAGAGCTTTCAGGAGAGACTCCTGGTGAATGAGGTTTTAAACATTATTAAAACCGTAGAGTTGAATTTGGAGACATGGATCAAGGCTTATGACGATCCTATGCTATCAAACTTCTTTGCTATGAACAATCACTGGCATCTGTTCAAGCACTTGAAAGGAACAAAGCTTGGGGATCTCTTGGGAGATACTTGGTTGAAAGAACATGAGCAGTACAAGGACTATTACTCCACAATTTTCTTGAGGGATAGCTGGGGAAAGCTTCCTGGTCATTTGAGCAGGGAAGGGCTGATTCTGTTCTCAGGAGGGCGTGCTACTGCTCGTGATCTGGTCAAGAAAAGGTTGAAAAAGTTCAATGAAGTTTTTGATGAGATGTATACAAAGCAATCAACCTGGGTTATGCCAGAACGAGATCTAAGGGAGAAAACAACCCAGCTTATAGTGCAAGCCGTGGTTCCTGTTTACAGGAGTTACATGCAGAATTATGGTCCCTTGGTTGAGCAAGATGCCAGCTCCTCAAAATATGCAAAATATAGTGTGCAGAAGCTGGAGGAAATGCTTTCGTCTCTTTATCAGCCGAAGCCTGTAAGACACGCCAGTTTGAAAGGTCGGCAATTTAGTGAGAAATTTGGCAATAAAATGGTGGATCTTCGTCGCACTGCCTCTGCAGTTGTGTAA 2046 0.4394 MADSVHASSDSKIQNLISAKKSLKLSLEKSKSLGLALEKAGPRLEEISQRLPSLESAVRPIRADKDALAAVGGHINRAVSPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVVKRLEEALRFLADNCGLAIQWLEDIVEYLEDNTVADERYLSNLKKSLQNLRELQNEEGKARLDGGLLEAALQKLENEFRQLLTENSVPLPMSPSPTLAGQACIAPSPLPVSIIHKLQAILGRLIANNRLEKCISIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSRIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACVEIQNLTRDLIKSVIDGAAEIFWELLVQVELQRQNPPPLDGNVPRLVSFITDYCNKLLGDDYKPILTQVLVIHRSWKRQSFQERLLVNEVLNIIKTVELNLETWIKAYDDPMLSNFFAMNNHWHLFKHLKGTKLGDLLGDTWLKEHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSTWVMPERDLREKTTQLIVQAVVPVYRSYMQNYGPLVEQDASSSKYAKYSVQKLEEMLSSLYQPKPVRHASLKGRQFSEKFGNKMVDLRRTASAVV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5801g00020 681 SUPERFAMILY Cullin repeat-like 85 647 IPR016159 -
Pral5801g00020 681 FunFam Exocyst subunit Exo70 family protein 135 653 - -
Pral5801g00020 681 Pfam Exo70 exocyst complex subunit 288 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pral5801g00020 681 Coils Coil 149 176 - -
Pral5801g00020 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 76 643 IPR004140 GO:0000145|GO:0006887
Pral5801g00020 681 Gene3D Exocyst complex component Exo70 136 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5801g00020 Pral-Chr5801 113162 116002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5801g00020 1 681 EXO70 exocyst subunit family AT4G31540 75.472 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5801g00020 K07195 - gmx:100796139 1127.08