Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5790g00036 ATGTCATCGTTTTCAGTGGGCACTCACTTGTCCCCATCCCAACACCTACGGAATCTCACAGTTCACCTTTCAGTTCATGGCATTCGTACTGTCGAATATTCACCATCAAGTCGGCTCCTTTCTGGCCTCTCTTGTTGTAGGACCAGACTTCCTAGATTGTTGGGTGATAGTGTATTGGCACGTGCTGAAAACAAGGCTAGAGGTCCTACTTCGTCCTTTCAGCCGCCTCAAGCTCCTCAAAATTGCGACTCACAATTTGAGGACCTGACGCCAGAACCCAGTACTAGCGATCCCTTGTGCTCAATTGACGAAGCTAGCTCACAAGATTTTGAAGGTAGAAACCAGTCCAAGACTGACTTGCTTAAGGCTCTTGCAATATTTGCAGCAGCTGCAACTGGAGTAGTGGCAATTAACCACTCTTGGGTAACTGATAATCAGGATCTTGCTATGGTATTGCTGTTTGGATTAGGGTATGCTGGCATCATATTTGAAGAATCCCTAGCCTTTAATAAAACAGGAGTAGGACTGTTGATGGCTGTAAGTCTTTGGGTGATACGGAGTATTGGGGCTCCTTCAACTGACATAGCTGTTTCAGAGTTGACGCATGCATCTGCAGAAGTCAGTGAAATCGTATTTTTCTTGCTTGGTGCCATGACCATTGTTGAGATAGTTGACGCTCATCAAGGATTTAAACTGGTTACCGACAATATAACAACTCGAAAGCCACGCCTTCTTCTTTGGGTGATTGGATTTGTGACATTTTTCCTCAGTGCAGTTCTAGACAACCTCACATCTACTATAGTCATGGTTTCTCTGTTACGGAAACTAGTGCCTCCATCCGAGTATCGAAAGATTCTTGGAGCTGTTGTTGTTATAGCTGCAAATGCTGGTGGCGCTTGGACTCCTATTGGTGATGTTACTACTACCATGCTGTGGATACATGGTCATGTATCTACATTGCCAACTATGAAGGATTTGTTTGTACCTTCGGCCATTTCTCTAGCTCTCCCTCTGGCTCTTTTGTCATTGACTAGTGAAGTGAATGGGAAGGGACGTGATTCTCCCACGGTTTTGGCATCTGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCTGTGGGTATAGGAGCTTTGGTGTTTGTGCCAGTTTTCAAGGCCCTAACAGGTTTACCTCCTTATATGGGGATGTTGCTTGGACTTGGTGTGCTTTGGATTCTTACGGATGCTATTCATTATGGGGAATCTGAAAGGCAGAAGCTAAAAGTACCACAAGCCTTATCTAGAATAGATACTCAAGGAGCATTGTTTTTTCTCGGAATTTTATTATCTGTTAGCAGCCTGGAGGCAGCAGGGATTCTTAGAGAAATAGCAAACTACCTCGATGCTCATATTCCAAATGTTGAGTTGATTGCAAGCGCAATTGGAGTCATATCAGCAATAATAGACAATGTTCCATTAGTTGCCGCAACAATGGGAATGTATGATGTCTCCTCCTTTCCTCAGGACTCAGAGTTTTGGCAGATGGTCGCATTCTGCGCCGGTACTGGCGGATCCATGCTGGTCATTGGCTCAGCTGCTGGAGTTGCATTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTACTTAAGGAAGATTAGTGGCTTTGCTTTTGCAGGCTATGCAGCTGGTATTGCTGCTTATTTAGTAGCTAATAACCTCCACATTTCTCTACCCACAACTCTTGCTGATGTTCCTTTCCTTTCTGGTTCATAA 1752 0.4463 MSSFSVGTHLSPSQHLRNLTVHLSVHGIRTVEYSPSSRLLSGLSCCRTRLPRLLGDSVLARAENKARGPTSSFQPPQAPQNCDSQFEDLTPEPSTSDPLCSIDEASSQDFEGRNQSKTDLLKALAIFAAAATGVVAINHSWVTDNQDLAMVLLFGLGYAGIIFEESLAFNKTGVGLLMAVSLWVIRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRLLLWVIGFVTFFLSAVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGHVSTLPTMKDLFVPSAISLALPLALLSLTSEVNGKGRDSPTVLASEQMAPRGQLVFSVGIGALVFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDAHIPNVELIASAIGVISAIIDNVPLVAATMGMYDVSSFPQDSEFWQMVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKISGFAFAGYAAGIAAYLVANNLHISLPTTLADVPFLSGS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5790g00036 583 Pfam Citrate transporter 159 514 IPR004680 GO:0016020|GO:0055085
Pral5790g00036 583 MobiDBLite consensus disorder prediction 65 102 - -
Pral5790g00036 583 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 57 583 IPR045016 GO:0006814|GO:0015297
Pral5790g00036 583 MobiDBLite consensus disorder prediction 67 102 - -
Pral5790g00036 583 NCBIfam sodium:proton antiporter NhaD 175 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5790g00036 Pral-Chr5790 228879 235013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5790g00036 1 583 Antiporters AT3G19490 75.815 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5790g00036 - - pcin:129291986 978.778