Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5790g00034 ATGACCACATCGCTCCTTCACATCACAACTCATCTCCCTCTTCTTCCCTTAACCAAAAAGAAGAAGAAGGAGAAGAAGATGGCTTTTCAAGATTCTTCCTTTCTTCTCGATTCTCTCTACTGTCATGAGCCCAACCTGGATGAACAAGACGACGAACAAGAACACCCACAATCAGAGTTATCAGATGAAACTGATCTCTCGAACAATAATGCTTCTCTGTTTCCTCTGCTTCTGTTGGAGCAAGATTTGTTCTGGGAAGACCAAGACCTCATCTCTCTCTTCACCAAAGAACAGCAACAACATCAAGAAGTTGCCAACTTCAACCTGGGTAATCTGGAATTTTCAGGCTCTCGCCTCTCCTTGGCTCGTCGTGAAGCTGTGGAGTGGATTCTTAAGGTGAATACTCACCATGGCTTCTCTGCTCTTACTTCAACTCTGGCCATTAATTACTTGGATAGGTTCATTTTAAGCTTCAAAATTGAAATAGAGAAGCCATGGATGATCCAACTGGTGGCTGTCACTTGCCTTTCTTTAGCTGCAAAGGTCGAAGAGACACAACTCCCTCCTCTTCTAGACCTCCAAGTGGAAGGTACGAAGTATGTGTTCGAGGGCAAGACGATTCTGAGAATGGAGCTTCTGGTTTTATCGACCCTGAAATGGAAGATGCACCCAGTGACACCATTATCGTTCTTAGATCACATCATTAGAAGGCTTGGATTGAAAACCCATCTTCACTGGCAATTTCTCAAGCGTTGTGAGCATCTTCTTCTATCAGCACTTTCAGATTCAAGATTCGTGGGCTGTCTTCCTTCTGTGTTGGCCACAGCCACAATGCTTCGTGTTATAGAGCAGATACAGCACAATGATGCAGCTGAATACAAAAAACAACTCCTGGATGTGCTTAAAATCAACAAGGAGAAAGTAGAGGAGTGTTATAAAGCAATTCTCGAGGCGTCTGATAATAAGAATAGAAAGAAGAGAAAGCATGATGAAAGAATAATAATCCCTGTGAACCTAAGTGGCTTAATCGATGGTGGAGTTGGGACCGATGAAGGATCCAACGGTTCGTGGAAAGTAGGGTCATCTTCATCATTATGTTCTTCACCAGATCAGTCTCTGTTGAAGAGGAACAGAGCTCAGCAACAGCATCAACAACAACAGCGTAATATGAAGTTGTCTCCATTGAATCTGGTTGGTGTTGCAATTGTTGTCTCATCTCCTAAATAA 1227 0.4303 MTTSLLHITTHLPLLPLTKKKKKEKKMAFQDSSFLLDSLYCHEPNLDEQDDEQEHPQSELSDETDLSNNNASLFPLLLLEQDLFWEDQDLISLFTKEQQQHQEVANFNLGNLEFSGSRLSLARREAVEWILKVNTHHGFSALTSTLAINYLDRFILSFKIEIEKPWMIQLVAVTCLSLAAKVEETQLPPLLDLQVEGTKYVFEGKTILRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCEHLLLSALSDSRFVGCLPSVLATATMLRVIEQIQHNDAAEYKKQLLDVLKINKEKVEECYKAILEASDNKNRKKRKHDERIIIPVNLSGLIDGGVGTDEGSNGSWKVGSSSSLCSSPDQSLLKRNRAQQQHQQQQRNMKLSPLNLVGVAIVVSSPK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5790g00034 408 FunFam D6-type cyclin 107 223 - -
Pral5790g00034 408 Pfam Cyclin, N-terminal domain 122 222 IPR006671 -
Pral5790g00034 408 SUPERFAMILY Cyclin-like 93 223 IPR036915 -
Pral5790g00034 408 FunFam CYCLIN D32 224 313 - -
Pral5790g00034 408 Gene3D - 122 223 - -
Pral5790g00034 408 CDD CYCLIN_AtCycD-like_rpt1 122 220 - -
Pral5790g00034 408 Pfam Cyclin, C-terminal domain 225 329 IPR004367 -
Pral5790g00034 408 SUPERFAMILY Cyclin-like 226 319 IPR036915 -
Pral5790g00034 408 MobiDBLite consensus disorder prediction 354 391 - -
Pral5790g00034 408 Gene3D - 224 315 - -
Pral5790g00034 408 PANTHER CYCLINS 59 322 IPR039361 -
Pral5790g00034 408 SMART cyclin_7 229 317 IPR013763 -
Pral5790g00034 408 SMART cyclin_7 128 216 IPR013763 -
Pral5790g00034 408 CDD CYCLIN_AtCycD-like_rpt2 225 315 - -
Pral5790g00034 408 MobiDBLite consensus disorder prediction 353 391 - -
Pral5790g00034 408 SMART Cyclin_C_2 225 336 IPR004367 -
Pral5790g00034 408 MobiDBLite consensus disorder prediction 48 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5790g00034 Pral-Chr5790 211881 213588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5790g00034 21 317 Core Cell Cycle Gene Families AT4G34160 55.219 2.15e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5790g00034 K14505 - gmx:547740 413.69