Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5790g00031 ATGGATCCAGTGACTGCTGATACACCTGATTTACCTCCTGCTAAACATCCATCTAGTTCACCTTCTGTTAAAGATCATGAAGGACAAACTTCTCCCCCTGCAGTCTCTGGGGAAGAAAATTCTTCTCATGTGACCTCATCTACGCAATCTTCCACTGGCATTTCATCATGGGCTAGAAATTTGAAAATTCCCCAGCCATTTTCTGGCTCTCAAGATGATTCAGCTACTGAAAATTCTGGGAAATCTACCTTTGCACGCTTCACTAATAATTTAGCTATGCGGTTGTCTCCAAAACCATCTTCATCAGATGACAGCTCCAATGAAGCCGCTCAATCTAATTTGATTGAAAGCTTCACAAAGGGTCTGGTTGACTCTTCGAGAAATGCTGTGAAAGCTGTGCAGGTCAAGGCCCGACATGTTGTTTCTCAGAATAAACGTCGATACCAGGAGGGAGGATTTGATCTAGATATGACATATATCACGGAAAACATTATAGCTATGGGATTTCCTGCTGGTGACATGAGCTCTGGGTTCTTTGGTTATGTAGAAGGGCTTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGAGACTCATCATAAGGGTAAATACAAAGTATACAATCTTTGCTCTGAGCGGCTGTATGATGCATCATTATTTGAGGGGAAGGTGGCTAGTTTCCCATTTGATGACCATAATTGCCCACCAATGCAACTGATTATATCATTTTGTCAAAGTGCTTACGCATGGTTGAAGCAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAAGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTGAAGTTCTTCCCTACCGCTGAGGAGTCCATTGATTACTACAACCAGAAAAGGTGTTTGGATGGAAAAGGGCTTGTTCTGCCAAGTCAGATTAGGTATGTCAAATATTTTGAACGTGTCTTGACTTACTTCAGTGGCGAAAATCCTCCTGCCCGCAGGTGCATGCTTAGGGGAGTCCGACTTCACAGGTGCCCTTACTGGATCAGGCCTTCTATAACTGTCTCAGATCATAGTGGTGTCTTGTTCTCAACTAAAAAGCATCCAAGGACCAAGGATCTTAATCCAGAAGATTTTTGGTTCAGTGCACCAAAGAAGGGAGTAATGGTCTTTGCATTGCCTGGGGATCCTGGTCTTACAGAGGTAGCTGGGGACTTTAAAATTCATTTTCATGATCGTCAAGGAGATTTTTACTGTTGGCTGAACACAACAATGACTGAAAACAGGAAAGTATTGAACACCAGTGATCTTGATGGTTTTGACAAGAGAAAATTACCTTCACCTGGATTCCTGGTTGAGGTTGTGCTTGTGGATTATAATGGCGATGTCACGACACCCAAACCTGAAGCTGTTACCAATAGATCAGATCAGAGGTCAAGTAGTATTCCTGCCCCAGTTGATGCAAGTACCACAGCTCCAAAAGCTGAAAAAGAGTCGGAGAATCGTGATAAAGAGGATGATGTGTTTTCAGATGGCGAGTCAGAGGATTCTACTTCAAGAAGCAGGCAGGCAAAAGCAGCTTCTGAAGCAGTTACTAATTCTAATTCTGCCACTGGATCTGAGTCTAAAACTTCAAGTGAGATGACAAGCTTAACGCATGCCACGGAACAAATTTCTTTGGGACCTACGAGTGCTACTCCAATTCCTAGTGGCAGTAAGCCAAAAAGTGGAGATGCAAGAACAGCGTCCGGTCTGGAAGCTCCCAGCTCAGAAAGTGAATTTAAGGCGATGGCCGCAGATGCCTCTGTATTTACGTTTGGGGATGATGAAGACTATGAAAGCGAGTGA 1848 0.4302 MDPVTADTPDLPPAKHPSSSPSVKDHEGQTSPPAVSGEENSSHVTSSTQSSTGISSWARNLKIPQPFSGSQDDSATENSGKSTFARFTNNLAMRLSPKPSSSDDSSNEAAQSNLIESFTKGLVDSSRNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGLYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPMQLIISFCQSAYAWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCLDGKGLVLPSQIRYVKYFERVLTYFSGENPPARRCMLRGVRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLNPEDFWFSAPKKGVMVFALPGDPGLTEVAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTSDLDGFDKRKLPSPGFLVEVVLVDYNGDVTTPKPEAVTNRSDQRSSSIPAPVDASTTAPKAEKESENRDKEDDVFSDGESEDSTSRSRQAKAASEAVTNSNSATGSESKTSSEMTSLTHATEQISLGPTSATPIPSGSKPKSGDARTASGLEAPSSESEFKAMAADASVFTFGDDEDYESE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5790g00031 615 ProSiteProfiles C2 tensin-type domain profile. 332 459 IPR014020 -
Pral5790g00031 615 MobiDBLite consensus disorder prediction 1 81 - -
Pral5790g00031 615 MobiDBLite consensus disorder prediction 493 522 - -
Pral5790g00031 615 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 123 560 - -
Pral5790g00031 615 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 131 328 - -
Pral5790g00031 615 MobiDBLite consensus disorder prediction 523 571 - -
Pral5790g00031 615 Gene3D Protein tyrosine phosphatase superfamily 131 328 IPR029021 -
Pral5790g00031 615 MobiDBLite consensus disorder prediction 23 81 - -
Pral5790g00031 615 ProSitePatterns Tyrosine specific protein phosphatases active site. 262 272 IPR016130 GO:0016311|GO:0016791
Pral5790g00031 615 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 159 326 IPR029021 -
Pral5790g00031 615 CDD PTP_PTEN 156 320 IPR045101 GO:0016791
Pral5790g00031 615 SMART PTEN_C2_2 330 458 IPR014020 -
Pral5790g00031 615 ProSiteProfiles Phosphatase tensin-type domain profile. 146 325 IPR029023 -
Pral5790g00031 615 MobiDBLite consensus disorder prediction 466 487 - -
Pral5790g00031 615 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 260 299 IPR000387 GO:0016311|GO:0016791
Pral5790g00031 615 MobiDBLite consensus disorder prediction 462 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5790g00031 Pral-Chr5790 196934 202598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5790g00031 4 615 Protein tyrosine phosphatase (PTP) family AT3G19420 65.434 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5790g00031 K01110 - gmx:100784003 948.347