Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5790g00030 ATGGACACCATCTCTTTCTTTGTTCTCTCATTCTTATTATTATCTTCTTCCTTGGTTCTCTCATCAGTACTCTCAGCTTCTTCCACGGAAAGAGAAGCGTTGGAGATCATCATCGGAGGCGGCGGAGATGCCCCTAATCCTCCTTCCCATTATGACCACCATCCTCCCGTCAACTGCCCGCCTCCACCACCACCGCCGCCACCGTCCCGGCTGGAGAAAGCACGGCGGGTGCTTCTGAAATTCGCCACCACAATTGACGATCCCAATCGCTTTACCAGCAACTGGAATGGTCCCAACCCTTGTCAGTACAGCGGAGTTAAATGTGCAACTTACCCAAATTCAAAAGAACAAGCAGTTTCAGGATTAGATTTCAACCAAGCTGGTTTCTCTACTGGTCAAGGTTCAAACTTGGGTCTCTCCGGAATCCTGGACTCCATTCCAGAATTGACATTCTTCCATGTCAATTCCAACAACTTCACAGGATCAGTCCCCACACAAATCACTAAATACCCATTTTTCTACGAGCTCGATTTAAGCAACAACAAGCTCCAGGGTAGTTTCCCAAAGGATGTTCTTTCTTCTAAGAAACTTATTTTCGTAGATCTCAGGTTCAACAACCTCACAGGACCAGTCCCTCCAGAACTCTTCAACATGGATCTAGACGTCATCTTCATCAATAACAACCAACTCAGCAGCCACCTGCCATGGAATTTCGGAGCCACGCCTGCGAGATACCTCACGTTCGCCAACAACAGATTCACTGGACCCATCCCAAGTAGCATAGGAAATGCGTCAAACACGTTGACCGAAGTTCTGTTCTTGGGAAACCAGTTTTCAGGGTGCTTGCCTTACGAGATTGGGTTCCTGAAAAAGGCCATAGTGTTTGATGTAAGCAAGAACTCATTGACGGGTCCAATCCCAGAATCTTTCGCTTGCCTACAGAAGATTCGCTTCTTGAATTTAGCTCACAACAAATTCTACGGCGCTGTTCCAGAATCAGTGTGCGAGCTTTCTGGGATTCGCAACGATGGGAATCTTACCTTAAGGGATAACTACTTCACTGAAGTTGGACCTAAATGCAAGAAGCTGATAAAATCGAAGGTGCTTGATGTGAGCCGGAATTGCATAAAGGGGCTTCCCAATCAGAAATCGCATGAAGAATGTTACAAGTTTTTGTCTTACGTGAAGCCATGTCCGAACGAATGGTCTCTCAAGATTGTTCCATGCAAGAAACACGATCCCAAGTATGATCATGAAACGTCTTCTTCTCCAGCGCCTGTGACTTACGAGTCTCTGAACCCGACACGGCATCGTTTAATGTGA 1323 0.4649 MDTISFFVLSFLLLSSSLVLSSVLSASSTEREALEIIIGGGGDAPNPPSHYDHHPPVNCPPPPPPPPPSRLEKARRVLLKFATTIDDPNRFTSNWNGPNPCQYSGVKCATYPNSKEQAVSGLDFNQAGFSTGQGSNLGLSGILDSIPELTFFHVNSNNFTGSVPTQITKYPFFYELDLSNNKLQGSFPKDVLSSKKLIFVDLRFNNLTGPVPPELFNMDLDVIFINNNQLSSHLPWNFGATPARYLTFANNRFTGPIPSSIGNASNTLTEVLFLGNQFSGCLPYEIGFLKKAIVFDVSKNSLTGPIPESFACLQKIRFLNLAHNKFYGAVPESVCELSGIRNDGNLTLRDNYFTEVGPKCKKLIKSKVLDVSRNCIKGLPNQKSHEECYKFLSYVKPCPNEWSLKIVPCKKHDPKYDHETSSSPAPVTYESLNPTRHRLM 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5790g00030 440 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 424 - -
Pral5790g00030 440 MobiDBLite consensus disorder prediction 416 440 - -
Pral5790g00030 440 Gene3D Ribonuclease Inhibitor 243 400 IPR032675 -
Pral5790g00030 440 MobiDBLite consensus disorder prediction 49 69 - -
Pral5790g00030 440 Gene3D Ribonuclease Inhibitor 71 242 IPR032675 -
Pral5790g00030 440 MobiDBLite consensus disorder prediction 38 69 - -
Pral5790g00030 440 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 235 330 - -
Pral5790g00030 440 Pfam Leucine rich repeat N-terminal domain 74 108 IPR013210 -
Pral5790g00030 440 SUPERFAMILY L domain-like 72 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5790g00030 Pral-Chr5790 183225 184817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5790g00030 70 393 Leucine-rich Repeat extension Gene Families AT4G13340 43.865 2.59e-77 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5790g00030 - - psat:127108214 515.383