Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5790g00029 ATGGGCACCATTTCTGTCTGTGTCCTTTCGTTCTTGTTCTCTTCTTCCTTGCTTCACTCTTCACTCTCTGTTTTTTCTGCAGAGCTCCCTCGCTCCGAAAGAGAAGCACTGCAGATCAACAGTGGCGGAAAAGGAGGGGATGCCCTTGCTCCTTTCCCTGATGACGACCCTCCTCGGTGCAGATGCCCCCGTCCGCCTCCTCCGCCGCCTCCGACGCCTCCGCCGCCTCCTCCGCCTCCGCCGCCTCCGCCGCTGCCTCCCCGGCTGGAGAGCGCACGCGGTGTACTCCTGCAATTCGCCGCCACAATCGACGACCCCACCGGCTTTACCAAAAACTGGAAGGAAGGCGTCAGCCCTTGTGAGTACAGAGGTGTTAAATGCGATAACTATTCAAAATCAGATGAGCTAGCCGTTTCAGGATTAGATTTCAACCAAGCCGGTTTATCTGCTCGTCAAGGTTCATTCTTAGATCTCACTTTAATCCTGGGAATCCCAGAATTAACATTCTTCCATGTCAACTCCAACAACTTCACAGGATCAGTCCCCAAAGAAATCATTCGATACCCATTTTTTTTCGAGCTTGATTTAAGCAACAACAAGCTCGAAGGTTATTTCCCATGGCAAGTTCTATTTGCCCAGCAACTCATTTTCTTAGATCTCAGGTTCAATAGCCTCACTGGACTGGTCCCTCCATTTCTCTTCTTTCTGGATCTAGACGTTATCTTCATCAACAACAACAACTTCTTCGGCTGCCTTCCATGGAATTTCGGGGCCACACCTGCGAGATACCTCACATTCGCCAACAACAAGTTCACTGGACCAATCCCAAGAAGCATAGGACTAGCTTCAAAGACCTTGACGGAAGTCCTGTTCTTGGGAAACCAGTTTTCTGGGTGCTTGCCTTTCGAAATTGGGTTCCTGAAAAACGCAGTAGTCTTCGATGTGAGCAACAACTTGTTGACGGGTCCCATCCCAAAATCTTTTGCTTGCTTAGAGAAGATTCAGTTCTTGAATTTAGCCAACAACAAATTCTACGGCGGTGTTCCAGAATCAGTGTGTGAGCTTCCTGGGATTCGCAACGCTGGGAATTTTTCCTTGGCGGGTAATTACTTCACTGAAGTTGGACCAGAATGCAAAAAGCTGATAGATTCGAAGGTGCTTGATGTGAGCCAGAATTGCATAAAGGGGCTTCTCAATCAGAGATCGCCAGAAGAATGTGAGAAGTTTTTGTCTTGGGTGAAGCCATGTCCGAATGCAAGGTCTCTAACCTATGTTCCATGTAAGAAATACAATTACAAGTACGTTGAAGCGGCTTCATCGCCTCCTGCTGCTCCTGTGACCTACGAGTCTCTCAAACCAATACGGCATCGTTTATTGTAA 1380 0.4833 MGTISVCVLSFLFSSSLLHSSLSVFSAELPRSEREALQINSGGKGGDALAPFPDDDPPRCRCPRPPPPPPPTPPPPPPPPPPPPLPPRLESARGVLLQFAATIDDPTGFTKNWKEGVSPCEYRGVKCDNYSKSDELAVSGLDFNQAGLSARQGSFLDLTLILGIPELTFFHVNSNNFTGSVPKEIIRYPFFFELDLSNNKLEGYFPWQVLFAQQLIFLDLRFNSLTGLVPPFLFFLDLDVIFINNNNFFGCLPWNFGATPARYLTFANNKFTGPIPRSIGLASKTLTEVLFLGNQFSGCLPFEIGFLKNAVVFDVSNNLLTGPIPKSFACLEKIQFLNLANNKFYGGVPESVCELPGIRNAGNFSLAGNYFTEVGPECKKLIDSKVLDVSQNCIKGLLNQRSPEECEKFLSWVKPCPNARSLTYVPCKKYNYKYVEAASSPPAAPVTYESLKPIRHRLL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5790g00029 459 MobiDBLite consensus disorder prediction 36 90 - -
Pral5790g00029 459 MobiDBLite consensus disorder prediction 62 89 - -
Pral5790g00029 459 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 87 437 - -
Pral5790g00029 459 Gene3D Ribonuclease Inhibitor 261 424 IPR032675 -
Pral5790g00029 459 Gene3D Ribonuclease Inhibitor 90 260 IPR032675 -
Pral5790g00029 459 SUPERFAMILY L domain-like 90 395 - -
Pral5790g00029 459 SUPERFAMILY Formin homology 2 domain (FH2 domain) 74 84 - -
Pral5790g00029 459 Pfam Leucine rich repeat N-terminal domain 91 128 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5790g00029 Pral-Chr5790 179257 180835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5790g00029 87 411 Leucine-rich Repeat extension Gene Families AT4G13340 42.508 1.04e-69 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5790g00029 - - gmx:100781083 462.611