Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5790g00028 ATGGAAAGACACATGCCTTCTTACACTATGATCATCTTCTTCTTCGCAACTATTATGTTATGTTTCCTGACGGTAAACCCTGAAATAATCGATGAATCTCCATTAGTCCCTGAAATCTTAAAATTCATAGACGAAAGAATCGCCTTCGTCTTCCCAATCATCCAAACCTTCAAGAACACAATAACCTCGGATCCACTTGGTGTGACCGAAACCTGGGTTGGTCCCAACGTTTGCAACTACACAGGTTTCTACTGCGGCCACCCTCCTGACAACCTCACCGCCTTCACCGTCGCCTCCATCGACTTCAATGGCTTCCAGCTGGCGGCCCCGAGCCTTGAGGGTTTCATCGATAAGCTGCCGGACTTGGCTCTGTTCCATGCCAACTCCAACAACTTCTCAGGGACCATACCGCCCACAATATCCAAGTTGAAGTTTCTGTATGAGCTTGATGTGAGTAATAACTTGCTTGCTGGGACGTTTCCTGTGGCGGTTCTGGACTTACCCGACCTGTCTTTCTTGGATATTCGATTCAATTTCTTCTCCGGCGAGGTTCCGCCGGAGATTTTCATGCAGCGGTTGGACGTGTTTTTCGTCAACGACAACAATTTCGTGCAGAGGCTTCCCGGTAACTTGGGAGACACGTCGGTGCTGTATCTCACTTTAGCTAATAACAAATTCACCGGACCCATTCCCCGGAGCATCGGAAGAGCCTCGGAAACATTGTTGGAGATCTTATTCCTCAACAACCAGTTAACAGGTTGTCTTCCTTACGAAATAGGGTTTTTAACAAAGCTGAGACTCCTGGATGCCGGAAACAACCACTTGACGGGGCCGTTGCCGTGCTCGCTGGGGTGTTTGGAGGCGGTGGAGCAACTGAACCTGGCCGGAAACTTGCTCTACGGACAAATACCGGAAGCGGTGTGTGCGTTGGGGAATCTGGCGAACCTGTCCTTATCGGACAATTACTTCACAGGAGTAGGACCATTGTGCAGAAAGCTGATAAAAAGAGGAGTACTTGACGTGAGGAAGAACTGCATTTACGGATATGGGGTTGCCGATCAGAGACCCACAAAAGAGTGCTTTCGATTCTACATGCACCCGAGGGCTTGTTTCAATCTGGCGTCGTTTAATTTCATGCCTTGTAAGGTTCCTCCATGGAGGCATACAAGGGATGGCCGTACCCCTAACAGACATTTACTGTCCTACTCCGCTCTTTCCAGAGCGAGAAATGTAAACAGGATAACACAAATGTAA 1254 0.4856 MERHMPSYTMIIFFFATIMLCFLTVNPEIIDESPLVPEILKFIDERIAFVFPIIQTFKNTITSDPLGVTETWVGPNVCNYTGFYCGHPPDNLTAFTVASIDFNGFQLAAPSLEGFIDKLPDLALFHANSNNFSGTIPPTISKLKFLYELDVSNNLLAGTFPVAVLDLPDLSFLDIRFNFFSGEVPPEIFMQRLDVFFVNDNNFVQRLPGNLGDTSVLYLTLANNKFTGPIPRSIGRASETLLEILFLNNQLTGCLPYEIGFLTKLRLLDAGNNHLTGPLPCSLGCLEAVEQLNLAGNLLYGQIPEAVCALGNLANLSLSDNYFTGVGPLCRKLIKRGVLDVRKNCIYGYGVADQRPTKECFRFYMHPRACFNLASFNFMPCKVPPWRHTRDGRTPNRHLLSYSALSRARNVNRITQM 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5790g00028 417 SUPERFAMILY L domain-like 58 347 - -
Pral5790g00028 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 37 383 - -
Pral5790g00028 417 Gene3D Ribonuclease Inhibitor 245 362 IPR032675 -
Pral5790g00028 417 Gene3D Ribonuclease Inhibitor 53 244 IPR032675 -
Pral5790g00028 417 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 236 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5790g00028 Pral-Chr5790 175175 176624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5790g00028 23 367 Leucine-rich Repeat extension Gene Families AT3G24480 44.928 2.94e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5790g00028 - - gmx:100813314 551.977