Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5790g00013 ATGGAGCAATCACAAAATCAAGCGCTCGAACAAGTTCAGTGCTTCGGCCGCAAGAAGACTGCCGTGGCCGTCACCTACTGCAAGCGCGGCCGTGGGCTCATCAAGATCAATGGCTGCCCAATTGAGTTGGTCCAGCCGGAGATCCTCCGATTCAAGGCATTCGAGCCGATCCTTCTCCTGGGAAAGCACCGATTTGCTGGGGTCGACATGAGGATCCGTGTGAAAGGAGGTGGTCACACGTCGCAGATATACGCTATCAGACAGAGTATTGCGAAAGCCCTTGTTGCGTTTTACCAGAAGTATGTTGACGAGCAGAGCAAGAAGGAGATCAAAGACATCCTTGTTAGGTACGACAGAACCTTGCTGGTTGCTGATCCCAGGCGCTGTGAGCCTAAGAAGTTCGGTGGTCGTGGTGCTCGTGCAAGATTCCAGAAGTCCTATCGTTAA 447 0.5257 MEQSQNQALEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVQPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5790g00013 148 Pfam Ribosomal protein S9/S16 16 148 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pral5790g00013 148 ProSitePatterns Ribosomal protein S9 signature. 76 94 IPR020574 GO:0003735|GO:0005840|GO:0006412
Pral5790g00013 148 Gene3D - 2 148 IPR014721 -
Pral5790g00013 148 FunFam 40S ribosomal protein S16 4 148 - -
Pral5790g00013 148 PANTHER RIBOSOMAL PROTEIN S9 5 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pral5790g00013 148 SUPERFAMILY Ribosomal protein S5 domain 2-like 11 148 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5790g00013 Pral-Chr5790 71082 71895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5790g00013 8 148 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 90.780 3.12e-94 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5790g00013 K02960 - gmx:100779794 280.411