Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5790g00012 ATGATCAATTCGCAAAAGGCTAAGCTTTTTGAAGCAACAATGGCATCATCATCCATTAATAATAATGGGCACCAAAAGCAAAGTGAAGCAGCAGTGATGCCCAAGAACCACTTGAGGAGTGATGCTCTTTACCAGTATATCATGGAAACCAGTGTTTATCCGAGAGAGCCAGAATGCATGAAGGAACTGAGAGAGATAACAGAAAAGCATCCATTGAGCATGATGGCGACGACGGCAGATGAAGTGCAATTTCTGAACATGCTGATTAAACTGATGAACGCCCAGAACGCCATGGAAATTGGTGTGCTTACTGGCTACTCTCTGCTTGCCACTGCTCTCGCTCTCCCCCAACATGGCAAGATATTGGCCATGGACATTGACAGGAAAACCTATGAAGTGGGCCGTCCCACGTTAGAGAAAGCTGGTGTTGCTCACAAAGTTGACTTTCGAGAAGGCCCTGCTCTTCCTATTCTTGATGAACTGTTCAAAGATGAGAACAATCATGGAAGCTTCGATTTCATATTTGTGGATGCCGACAAGAACAATTATCTGAACTATCACGGGAGGTTGATCGAGTTGGTTAGGGTTGGGGGTGTGATTGCCTACGACAACACCCTATGGAATGGGTCTGTCGTGACATCGCCTGACATGTCTTTTGATGAGCACGTCATGTCCCTTAGAGACTTTGTGTTGGAGCTCAACAAGGCTCTTGCTGTGGACCCTAGGATTGATATTTGCATGCTTCCTGTTGGTGATGGAATCACTCTGTGCCGTCGGATGAACTAA 786 0.4593 MINSQKAKLFEATMASSSINNNGHQKQSEAAVMPKNHLRSDALYQYIMETSVYPREPECMKELREITEKHPLSMMATTADEVQFLNMLIKLMNAQNAMEIGVLTGYSLLATALALPQHGKILAMDIDRKTYEVGRPTLEKAGVAHKVDFREGPALPILDELFKDENNHGSFDFIFVDADKNNYLNYHGRLIELVRVGGVIAYDNTLWNGSVVTSPDMSFDEHVMSLRDFVLELNKALAVDPRIDICMLPVGDGITLCRRMN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5790g00012 261 Pfam O-methyltransferase 48 260 IPR002935 GO:0008171
Pral5790g00012 261 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 259 IPR029063 -
Pral5790g00012 261 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 36 260 IPR002935 GO:0008171
Pral5790g00012 261 FunFam Caffeoyl-CoA O-methyltransferase 1 29 261 - -
Pral5790g00012 261 Gene3D Vaccinia Virus protein VP39 36 261 IPR029063 -
Pral5790g00012 261 PANTHER O-METHYLTRANSFERASE-RELATED 35 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5790g00012 Pral-Chr5790 58100 60568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5790g00012 21 261 Monolignol Biosynthesis Gene Families AT4G34050 71.020 7.11e-131 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5790g00012 K00588 - thj:104819570 364.385