Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5786g00039 ATGAGAAGAAAACATATTTTTCCTCTCCACCCTTGCATAATAGATTTTGGCGTCTTCTTCAACAATTTATCTGGCAACATTCCTCCAGAGTTCGGGCTCCATTCAAGCCTCAGAAGATTTGAACTTGCATCAAACAGTTTAACTGGTGGTCTTCCTCAGAACTTGTGTTACCATGGCAGTTTATTTTGGTTAACAGCTTATCACAACAAACTCAGTCGGGAATTACCAGAATCATTAGGCAATTGTAGCAGCTTGTTCGAGTTGAAGGTATATAACAATGAGCTCTCTGGTGAAATTCCTAGCAGCCTTTGGGAATCTCAGCATTTGTCAACTTTAATGATCAATGACAATAAGTTCACAGTCTATAGTATTATTCTTGATTGGCCAAGGAGATTGCAAATAGCCATTGGGATTGCACAAGGTTTGAGCTACATGCATCATGATAACTCACCGCCCATTATTCATCGTGATGTCAAAGTAAGCAACATTCTCTTGGATTCTCAGTTCAATGCAAAAGTTGCAGATTTTGGTCTTGCCAAGATGTTGATCAAACCAGGACAACTTGATACCATGTCATGTGTGGTTGGCTCTTTGGTTACATTGCTCCAGAGAGTGAATGAAAAGGTTGATGTACATGGCTTTGGGGTTATCCTTCTGGAACTGACAACAGGAAAAGAAGCTAACTATGGAGATGAGCACTCGTCTCTTGCAGAATGGGCATTGCATCAGATTCAACTAGGAAACAACATAGAACAAGTTCTAGACAAAGATGTTAAGGAAACTTCATACTTAGAGGAAATGTGCAGTGTCTTCAAGCTGGGGGTGATGTGTACAGCCAAAGAGCCAGCTGGTAGGCCTTCTATGAAGGAGGTTCTGAATATATTGCTCAGCTTGAAAGAACCATGTGGTTATGTAGAAATGAATTTTGGTCATTTTGATGCTGTTCCTCTCCTAAAGAATTCCAAAAGGGAGAGTAGGTTAGATAATGATAATGATAGTTAA 1002 0.3992 MRRKHIFPLHPCIIDFGVFFNNLSGNIPPEFGLHSSLRRFELASNSLTGGLPQNLCYHGSLFWLTAYHNKLSRELPESLGNCSSLFELKVYNNELSGEIPSSLWESQHLSTLMINDNKFTVYSIILDWPRRLQIAIGIAQGLSYMHHDNSPPIIHRDVKVSNILLDSQFNAKVADFGLAKMLIKPGQLDTMSCVVGSLVTLLQRVNEKVDVHGFGVILLELTTGKEANYGDEHSSLAEWALHQIQLGNNIEQVLDKDVKETSYLEEMCSVFKLGVMCTAKEPAGRPSMKEVLNILLSLKEPCGYVEMNFGHFDAVPLLKNSKRESRLDNDNDS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5786g00039 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Pral5786g00039 333 SUPERFAMILY L domain-like 20 124 - -
Pral5786g00039 333 FunFam Os07g0541700 protein 107 197 - -
Pral5786g00039 333 FunFam Leucine-rich repeat receptor protein kinase EMS1 27 124 - -
Pral5786g00039 333 SUPERFAMILY Protein kinase-like (PK-like) 108 295 IPR011009 -
Pral5786g00039 333 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 120 - -
Pral5786g00039 333 Gene3D Transferase(Phosphotransferase) domain 1 121 297 - -
Pral5786g00039 333 SMART serkin_6 86 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5786g00039 333 Pfam Protein kinase domain 133 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5786g00039 333 ProSiteProfiles Protein kinase domain profile. 1 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5786g00039 333 Gene3D Ribonuclease Inhibitor 12 120 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5786g00039 Pral-Chr5786 378758 381480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5786g00039 120 295 Receptor kinase-like Gene Family AT5G25930 56.831 6.25e-60 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5786g00039 Pkinase 5.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5786g00039 - - gmx:100820277 303.523