Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5786g00033 ATGATCAATGACAATAAGTTCACAGTCTATAGTATTATTCTTGATTGGCCAAGGAGATTGCAAATAGCCATTGGGATTGCACAAGGTTTGAGCTACATGCATCATGATAACTCACCGCCCATTATTCATCGTGATGTCAAAGTAAGCAACATTCTCTTGGATTCTCAGTTCAATGCAAAAGTTGCAGATTTTGGTCTTGCCAAGATGTTGATCAAACCAGGACAACTTGATACCATGTCATGTGTGGTTGGCTCTTTTGGTTACATTGCTCCAGAATATGCTCAAACGAAGAGAGTGAATGAAAAGGTTGATGTACATGGCTTTGGGGTTATCCTTCTGGAACTAACAACAGGAAAAGAAGCTAACTATGGAGATGAGCACTCGTCTCTTGCAGAATGGGCATTGCATCAGATTCAACTAGGAAACAACATAGAACAAGTTCTAGACAAAGATGTTAAGGAAACTTCATACTTAGAGGAAATGTGCAGTGTCTTCAAGCTGGGGGTGATGTGTACAGCCAAAGAGCCAGCTGGTAGGCCTTCTATGAAGGAGGTTCTGAATATATTGCTCAGCTTGAAAGAACCATGTGGTTATGTAGAAATGAATTTTGGTCATTTTGATGCTGTTCCTCTCCTAAAGAATTCCAAAAGGGAGAGTAGGTTAGATAATGATAATGATAGTTAA 684 0.3962 MINDNKFTVYSIILDWPRRLQIAIGIAQGLSYMHHDNSPPIIHRDVKVSNILLDSQFNAKVADFGLAKMLIKPGQLDTMSCVVGSFGYIAPEYAQTKRVNEKVDVHGFGVILLELTTGKEANYGDEHSSLAEWALHQIQLGNNIEQVLDKDVKETSYLEEMCSVFKLGVMCTAKEPAGRPSMKEVLNILLSLKEPCGYVEMNFGHFDAVPLLKNSKRESRLDNDNDS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5786g00033 227 Gene3D Transferase(Phosphotransferase) domain 1 3 200 - -
Pral5786g00033 227 SUPERFAMILY Protein kinase-like (PK-like) 14 189 IPR011009 -
Pral5786g00033 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Pral5786g00033 227 Pfam Protein kinase domain 21 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5786g00033 227 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 13 190 - -
Pral5786g00033 227 SMART serkin_6 5 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5786g00033 227 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5786g00033 227 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 2 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5786g00033 Pral-Chr5786 305285 307966 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5786g00033 8 189 Receptor kinase-like Gene Family AT5G25930 62.295 3.01e-72 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5786g00033 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5786g00033 - - gmx:100798963 332.798