Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5786g00030 ATGAGAAATTCAACTCCATTGTTCCGTCTCCATGTCCCCCTTAACTTCTTCTTCCTTCTCTTTCTGAGCTGTGCAAATTCTCAGTCTGAACTCTATGATCAAGAACATGGAGTTCTGCTAAGGATGAAACAGTACTTTAAAAGCCCATCTTCTCTCAGTCACTGGACACAATCAGAGTCATCTCATTGTTCATGGAAAGAGATCACCTGCAACAATAACTCTGTCTCAGGGCTGGCTCTGAAAGAGATCAATATCATTCAACCGATACCAACTTTCATCTGTGAGCTTAAAAACCTCACTTCTATTGATTTTCATTTGAATTTCATTCCTGGGGAGTTCCCAACGTATCTCTACAACTGTTCCAAGCTGGAGCACCTGGACCTTTCTGATAATTACTTCATTGGCAAGGTTCCAGAGGACATTGACAGATTGGCTAGCCTGCGTTTTCTTAACCTCGGCGGCAACAACTTTTCCGGTGAGATTCCGGAGAGCATTACGCGGTTAAAAGAGCTCACAACTCTTCACCTTGATTTATGTCTATTCAATGGCAGTATCCCAATTGAAATAGGCGACTTATCCAATCTTGAAATCTTGAATTTGGGCGTCAACCCATTCTCTCCTTCAAAGTTTCCTTCTAGCTTCACCAACCTCACGAAGTTGAAGCATTTTCTGATGTCTGATTGCAACTTGATTGGTGAAATCCCAGAAAGTATTGGGAAACTGGTAGTCTTAGAGATGTTGGATTTATCCCGAAATCAGTTAAGTGGCAAAATTCCAAGTAGTTTGTTTATGCTGAAGAATCTCAGCATGATGTTTCTTTCAAGGAATCAGCTTGATGGGGAGCTACCTCAAGTGATTGAAGCCTTAAACTTGACCATCATTGATCTTCCTCAGAACAAGCTTACAGGAAAGATACCTAATGGCTTTGGAAATCTCCATAAGCTAACTGGCTTGAACTTGGGACTTAATCAATTATCAGGTGAGATTCCCGAAAGCCTAGGCCGTCTTCAATCTATAATAGATTTCAGCGTCTTCTTCAACAATTTATCAGGCAACATTCCTCCAGAGTTCGGGCTCCATTCAAACCTTGGAAGATTTGAACTTGCATCAAACAGTTTAACGGGCAGTCTTCCTCAGAATTTGTGTTACCATGGCAGTTTATTTCGATTAACAGCTTATGACAACAAACTCAGTGGTGAACTACCAGAATCATTAGGAAATTGTAGCAGCTTGCTAGAGTTGAAGGTCTACAATAATGAGCTCTCTGGTGAAATTCCTAGCAGCCTTTGGAAGTCTCGGCATTTGTCAACTTTAATGATCAGTGAAAATAAGTTCACAGGTGAGCTTCCTGAAACATTGCCTGTGAATGTTTCACAGATGGTAATTAGTTACAATCAGTTTTCTGGCAGAATTCCAGCAGCAATATCTTCCATGAAAAATCTGGTTGTGTTCAAGGCAAGTGGCAACCTCTTTAATGGAAGTATTTCGCAAGAGCTAACCAGTCTTTCTCAGCTTGCAACTCTGCTTCTTGATCAGAACAAACTTTCTGGGCCGCTTCCATCTAAAATCATATCATGGAAATCTCTGAGAATTCTAAACTTGAGCCAAAATCAACTTTCTGGGGAAATCCCAGATTCAATTACTCGTTTGATTGACCTTGCACAACTAGACTTGTCAGAAAACCAATTATCTGGCCAAATTCCATCTCAACTAGCCCTTTTGAGAAACTCTGATCTCAACCTTTCCTCTAATCACTTGACTGGGAAGATTCCTAGTGAATTTGAAAATCTTGCTTATGCCACCAACTTTTTGAACAATCCGGGCCTTTGTGCTAACACAGCTGGATTAAACCTTAAATTGTGCAATTCTGGTTCTGTCCCTCAGAAGTCAAGCAAAGGCTCATCCATGTCTCTTGCTTTGATCATAGGCCTTGCTATAGTAGCCTCCATAGCAATTTCCTTGTTATCACTTTTCATGATGAAATTCTACCAAAAGAGAAAGCAAGAATTGGACACTTCATGGAAGTTGACTTCCTTCCAGAAGCTAACTTTCACAGAATCAAAGATTGTCTCATCCTTGACAGACCATAACATCATAGGTAGAGGAGGGTACGGTACTGTGTACCGTGTTGCTGTCAATGATAAAGACCATGTTGCTGTGAAGAAGATAAGCAATAACAGGAAGTTAGATCATAAGCTTGAGAATGCATTTCTTGCAGAAGTTGAAATCTTAGGCACTATTCGTCACATCAACATAGTGAAGTTACAATGTTGTATATCTAATGAGGATTCTCTACTTCTAGTATATGAGTATTTGGAACATCATAGTCTTGATAAGTGGCTGCACAAGAAGAATGGCTCATTGGGTGTGTCATCTGCAGTTCATAGCATTATTCTTGAGTGGCCAAGGAGATTGCAAATAGCCATTGGGATTGCACAAGGTTTGAGCTACATGCATCATGATAACTCGCCGCCCATTATTCATCGTGATGTCAAAGTAAGTAACATTCTCTTGGACTCTCAGTTCAATGCAAAAGTTGCAGATTTTGGTCTTGCCAAGATTTTGATCAAACCAGGACAACTTGATACCATGTCATGTGTGGTTGGCTCTTTCGGTTACATTGCTCCAGAATATGCTCAAACGAAAAGAGTGAATGAAAAGGTTGATGTATATGGCTTTGGGGTCATCCTTCTAGAGCTGACAACAGGAAAAGAAGCTAACTATGGAGATGAGCACTCATCTCTTGCAGAATGGGCATGGCGTCAGATTCAACTAGGAAACAACATTGAACAAGTTCTAGACGAAGATGTTAAGGAAACTTCATATTTGGAGGAAATGTGCAGTGTCTTCAAGCTTGGGGTGATGTGTACAGCCAAAGAGCCAGCTGGTAGGCCTTCCATGAAGGAGGCTCTGAATATATTGCTCCGCTTGAAAGGACCATGTGGTTACATAGAAATGAATTTTGGTCATTTTGATGATGTTCCTCTCCTAAAGAATTCCAAAAGGGAGAGTAGGTTAGATATTGATAATGATAGTTAA 3039 0.4051 MRNSTPLFRLHVPLNFFFLLFLSCANSQSELYDQEHGVLLRMKQYFKSPSSLSHWTQSESSHCSWKEITCNNNSVSGLALKEINIIQPIPTFICELKNLTSIDFHLNFIPGEFPTYLYNCSKLEHLDLSDNYFIGKVPEDIDRLASLRFLNLGGNNFSGEIPESITRLKELTTLHLDLCLFNGSIPIEIGDLSNLEILNLGVNPFSPSKFPSSFTNLTKLKHFLMSDCNLIGEIPESIGKLVVLEMLDLSRNQLSGKIPSSLFMLKNLSMMFLSRNQLDGELPQVIEALNLTIIDLPQNKLTGKIPNGFGNLHKLTGLNLGLNQLSGEIPESLGRLQSIIDFSVFFNNLSGNIPPEFGLHSNLGRFELASNSLTGSLPQNLCYHGSLFRLTAYDNKLSGELPESLGNCSSLLELKVYNNELSGEIPSSLWKSRHLSTLMISENKFTGELPETLPVNVSQMVISYNQFSGRIPAAISSMKNLVVFKASGNLFNGSISQELTSLSQLATLLLDQNKLSGPLPSKIISWKSLRILNLSQNQLSGEIPDSITRLIDLAQLDLSENQLSGQIPSQLALLRNSDLNLSSNHLTGKIPSEFENLAYATNFLNNPGLCANTAGLNLKLCNSGSVPQKSSKGSSMSLALIIGLAIVASIAISLLSLFMMKFYQKRKQELDTSWKLTSFQKLTFTESKIVSSLTDHNIIGRGGYGTVYRVAVNDKDHVAVKKISNNRKLDHKLENAFLAEVEILGTIRHINIVKLQCCISNEDSLLLVYEYLEHHSLDKWLHKKNGSLGVSSAVHSIILEWPRRLQIAIGIAQGLSYMHHDNSPPIIHRDVKVSNILLDSQFNAKVADFGLAKILIKPGQLDTMSCVVGSFGYIAPEYAQTKRVNEKVDVYGFGVILLELTTGKEANYGDEHSSLAEWAWRQIQLGNNIEQVLDEDVKETSYLEEMCSVFKLGVMCTAKEPAGRPSMKEALNILLRLKGPCGYIEMNFGHFDDVPLLKNSKRESRLDIDNDS 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5786g00030 1012 PANTHER UNNAMED PRODUCT 290 906 - -
Pral5786g00030 1012 Pfam Leucine Rich Repeat 579 597 IPR001611 GO:0005515
Pral5786g00030 1012 Pfam Leucine Rich Repeat 290 312 IPR001611 GO:0005515
Pral5786g00030 1012 Pfam Leucine Rich Repeat 528 548 IPR001611 GO:0005515
Pral5786g00030 1012 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 188 287 - -
Pral5786g00030 1012 FunFam Kinase family with leucine-rich repeat domain-containing protein 772 983 - -
Pral5786g00030 1012 ProSiteProfiles Leucine-rich repeat profile. 528 550 IPR001611 GO:0005515
Pral5786g00030 1012 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
Pral5786g00030 1012 SMART LRR_typ_2 241 265 IPR003591 -
Pral5786g00030 1012 SMART LRR_typ_2 526 550 IPR003591 -
Pral5786g00030 1012 SMART LRR_typ_2 144 168 IPR003591 -
Pral5786g00030 1012 SMART LRR_typ_2 192 216 IPR003591 -
Pral5786g00030 1012 SMART LRR_typ_2 312 336 IPR003591 -
Pral5786g00030 1012 FunFam Leucine-rich repeat receptor-like protein kinase TDR 309 623 - -
Pral5786g00030 1012 SUPERFAMILY Protein kinase-like (PK-like) 683 974 IPR011009 -
Pral5786g00030 1012 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Pral5786g00030 1012 SMART serkin_6 693 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5786g00030 1012 FunFam Receptor-like protein kinase HSL1 673 771 - -
Pral5786g00030 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Pral5786g00030 1012 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Pral5786g00030 1012 Gene3D Ribonuclease Inhibitor 344 622 IPR032675 -
Pral5786g00030 1012 ProSiteProfiles Protein kinase domain profile. 693 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5786g00030 1012 FunFam Receptor-like protein kinase HSL1 isoform A 32 183 - -
Pral5786g00030 1012 Pfam Leucine rich repeat N-terminal domain 37 71 IPR013210 -
Pral5786g00030 1012 Gene3D Phosphorylase Kinase; domain 1 663 771 - -
Pral5786g00030 1012 Pfam Protein kinase domain 695 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5786g00030 1012 SUPERFAMILY RNI-like 137 456 - -
Pral5786g00030 1012 SUPERFAMILY L domain-like 456 600 - -
Pral5786g00030 1012 Gene3D Ribonuclease Inhibitor 32 208 IPR032675 -
Pral5786g00030 1012 Gene3D Ribonuclease Inhibitor 209 343 IPR032675 -
Pral5786g00030 1012 Gene3D Transferase(Phosphotransferase) domain 1 772 981 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5786g00030 Pral-Chr5786 238773 242579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5786g00030 35 974 Receptor kinase-like Gene Family AT5G25930 51.212 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5786g00030 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5786g00030 - - gmx:100798963 1256.51