Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5786g00002 ATGGCGTCTTCGATTCATGCCTCTCTGTCCGCCTTCAATCTATCTGGTCAAAACCCTACTCGGCGCCTCTCCTTTCCTCATCAGATTTGCGTTGTTTCGCAGAACAATATATCTAACTTGAAAGCATCCAAGCCACTGAGACTAGATGCTAAATGTGCGAGAGTAATGGCCTCAAGGAGTGTGTCCCAAGCAAGCAGAGCTGCTACAACAGAAGACGTTCTAGAGTGGGTCAAACAGGACAAGCGAAGAATGCTTCATGTTGTATATCGTGTTGGGGACTTGGAGAGGACCATCAAATTTTATACAGAGTGCCTGGGAATGAAGCTGCTGAGAAAACGTGATATACCAGAGGAGAGGTATACGAACGCCTTTCTTGGATATGGACCTGAAGATGCACAGTTTGTTATTGAACTGACATACAATTATGGAGTTGATGCATATGATATTGGGAATGGATTTGGCCATTTTGGCATTGCTGTTGATGATGTTGAAAAGACTGTAGACCTCATTAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCAGGTCCTGTTAAGGGAGGCAGCACAATAATTGCTTTCATCGAAGATCCAGATGGATATAAATTTGAGCTTTTGCAAAGAGCTTCCTCTCCTGAGCCTTTGTGCCAACTAATGCTTCGCGTAGGTGATCTTAATCGTTCCATAGAATTTTATGAGAAGGCTTTTGGTATGGAACTTCTTCGGACACGAGATAATCCTGAGCAAAAGTATACCATTGCAATGCTAGGTTATGGTCCTGAAGATACGAGTGCTGTCTTGGAATTGACTTACAATTATGGAGTCACTGAGTATGATAAAGGAAATGGTTATGCTCAGATTGCAATAGGTACAGATGATGTTTACAGGACTGCCGAAGCTATCAAACTTGTTGGAGGAAAGATTACTCGGGAACCTGGACCATTACCTGGCATCAACACAAAAATAACAGCATGCTTAGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTTGTTAAAGAGTTGGAGTAG 1038 0.4249 MASSIHASLSAFNLSGQNPTRRLSFPHQICVVSQNNISNLKASKPLRLDAKCARVMASRSVSQASRAATTEDVLEWVKQDKRRMLHVVYRVGDLERTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDAQFVIELTYNYGVDAYDIGNGFGHFGIAVDDVEKTVDLIRAKGGKITREPGPVKGGSTIIAFIEDPDGYKFELLQRASSPEPLCQLMLRVGDLNRSIEFYEKAFGMELLRTRDNPEQKYTIAMLGYGPEDTSAVLELTYNYGVTEYDKGNGYAQIAIGTDDVYRTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNVDFVKELE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5786g00002 345 NCBIfam lactoylglutathione lyase 83 208 IPR004361 GO:0004462|GO:0046872
Pral5786g00002 345 Gene3D - 55 209 IPR029068 -
Pral5786g00002 345 FunFam Lactoylglutathione lyase 211 345 - -
Pral5786g00002 345 ProSitePatterns Glyoxalase I signature 1. 86 107 IPR018146 GO:0004462|GO:0046872
Pral5786g00002 345 ProSitePatterns Glyoxalase I signature 2. 150 162 IPR018146 GO:0004462|GO:0046872
Pral5786g00002 345 FunFam Lactoylglutathione lyase 80 210 - -
Pral5786g00002 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 213 337 IPR037523 -
Pral5786g00002 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 83 207 IPR037523 -
Pral5786g00002 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 82 209 IPR029068 -
Pral5786g00002 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 214 337 IPR029068 -
Pral5786g00002 345 Gene3D - 210 345 IPR029068 -
Pral5786g00002 345 CDD GlxI_Ni 84 205 - -
Pral5786g00002 345 PANTHER LACTOYLGLUTATHIONE LYASE 61 345 - -
Pral5786g00002 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 217 331 IPR004360 -
Pral5786g00002 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 84 204 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5786g00002 Pral-Chr5786 7639 13128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5786g00002 216 334 Calmodulin-binding Proteins AT1G08110 29.655 1.14e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5786g00002 K01759 - csav:115706866 557.37