Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5783g00004 ATGTTTGCAGGGACAGCCGCTGCTATAGTGAACCAGAAGACACAGGGCGCCGAGACTCTTATCGGCTGCGCCGCCACCACTGGTCTCGCCGTCATGATAGTCATCCTCTCCACCGGCCACATCTCCGGCGCTCATCTCAACCCCGCCGTCACTATCTCCTTTGCTGCACTAAAGCACTTTCCATGGAAACATGTTCCAGTGTACATCGGAGCTCAAGTACTGGCGTCAATATGTGCAGCATTTGCACTGAAGGGGATATTTCATCCCTTCATGAATGGAGGAGTCACTGTTCCTTCTGCAGGATATGGCGAAGCCTTTGCTTTGGAGTTCATCATCAGTTTCAACCTCATGTTCGTCGTCACCGCCGTAGCCACCGACACAAGAGCCGTTGGAGAACTTGCGGGAATCGCAGTGGGAGCCACGGTCATGCTCAACATCCTTATCGCAGGGCCAGCAACAGGAGGGTCAATGAACCCAGTGAGAACACTAGGGCCAGCAATAGCAGCAAATAACTACAGAGCCATTTGGGTATATCTCATAGCTCCCATTCTTGGAGCTCTCAGTGGAGCAGGCACTTACACTCTGGTGAAGCTCACTGATGAACAAGAAGAAGAGGCCAAGGTCACAACTTCTGCCCCTGGCAGCTTCAGAAGATGA 657 0.5251 MFAGTAAAIVNQKTQGAETLIGCAATTGLAVMIVILSTGHISGAHLNPAVTISFAALKHFPWKHVPVYIGAQVLASICAAFALKGIFHPFMNGGVTVPSAGYGEAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIAANNYRAIWVYLIAPILGALSGAGTYTLVKLTDEQEEEAKVTTSAPGSFRR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5783g00004 218 Gene3D Glycerol uptake facilitator protein. 1 210 IPR023271 -
Pral5783g00004 218 PRINTS Major intrinsic protein family signature 176 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5783g00004 218 PRINTS Major intrinsic protein family signature 64 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5783g00004 218 PRINTS Major intrinsic protein family signature 108 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5783g00004 218 PRINTS Major intrinsic protein family signature 139 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5783g00004 218 PRINTS Major intrinsic protein family signature 27 51 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5783g00004 218 ProSitePatterns MIP family signature. 45 53 IPR022357 -
Pral5783g00004 218 PANTHER AQUAPORIN NIP2-1 1 202 IPR034294 -
Pral5783g00004 218 FunFam Aquaporin NIP2-1 1 208 - -
Pral5783g00004 218 SUPERFAMILY Aquaporin-like 2 202 IPR023271 -
Pral5783g00004 218 Pfam Major intrinsic protein 2 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5783g00004 Pral-Chr5783 78651 80782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5783g00004 1 218 Major Intrinsic Protein MIP AT1G80760 82.569 4.87e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5783g00004 K09874 - gmx:100815637 370.163