Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5781g00008 ATGACTTCAAGATCATTCCCTCCTACTACAGATCACCATTTTTTCACCAAATACAAGGTCCTTTTCCTGGCTCTCACCATCTCAGCGTCTCTAGTCATTTTCTGCACAATATTTTACTTCCTTTACCATCTATGGTACTCCGTTGTACACAGAGCTAAAACGATCCCGTTTGATGCAAATTCTCCCTTGAAACTCCGAAGATTTTCATACAAAGAGCTCAAGCAAGCAACTAATGGCTTTCACACTGAAAATGTAATTGGCAAAGGCGGGTCTAGCACAGTCTTTAAAGGAAAGCTTAACGATGGGAAATCAATTGCTATTAAGCGTCTAGATGCTTTGTGTATACAAACACAGCAAGAGTTTCAGAATGAGCTCCAGATTCTTGGTGGGTTAACGTCCCCTTTCGTTGTCACCCTTCTGGGATATTGTATGGAGAAGAACAAGAGAGCTTTGGTGTTTGAATATATGCCTAAGAGAAGCTTGCAGGAGTCTCTCTTTGGAGATGAACGCTGTTTGAGTTTAAGCTGGGAGAGGAGGTTTCTTGTAATATTGGATGTTGCTAAAGCTTTGGAATTCCTTCACCTTGATTGTGACCCTCCAGTGATTCATGGGGATATTAAACCAAGCAATGTTCTGCTTGATGAAGAGCACCATGCAAAGATTTCAGATTTCGGATTGTCAAGGATTAAAGTGGAGGAGGGTGAGTTTGATGGGAATATGTTTAGCCAGGACTTGGGTGATAAGAGTCAGGAGCTATGGAAGAGCCAAGAGTTTTCAGGTAATTTAACTGCTGGAAGCCCAGCTGCAGATGAGCGTGTTAATGAAGTAGATTTTGCCCTAGCTTTGCAGGCATCTTCTTCATCCAAGTATAGTAGGGTAGGTCTTAATGTTGGAGCTCTGAACTTGAATTCTTTGAATTATAATGCCTACATAAGTGAAAGTGAAGCAAGGACAACTAGTGTCAAGGGGAAGGAAATCTTGAGTTTCGATATTGGTGGGGATGATCGGAGGAACGAGTTTGTTCCTTGTGATGATGATTTTTCCAATATTGATCATAGCAAAGAGTTAAATGTTAATGCTTCCTCAGTAGATAAAGAAAAGCCAAGTGAAAAACAACGGGGAAAAGATTGGTGGTGGAGACAGGATGAAAGTGCAGAATTATGCAGTAAAGATTATGTCATGGAGTGGATAGGGAGTCAGATTCATCCATCAAACACTGATTGGGATGAAGAAAAGAACATTCATGAAGAAACAGAACTGGGAAATAAAAGTCCAACAGATAAAATAGATGATGTACATGGACCTCAATTTCAAGCAATGGGGACAAAAGATGCTGACAATGGTGCAGATGAGAACAAAGAATCAGTGGAAAAGAAACATCATGAGAAGCATAGGAAGATGCAAGAGCTGTGGAAAGAAGAGAATCTTGGAGAATCAAGCAAGAACAATGGCAACCTGAAAAATCTTCAAACAAAGTGGAAGCAAGGGTTTAAAGTACCACATTTTGGTTTGGATAGGAAGTTTTATCTCTGCAGATGTCGGAAATTCCAAAGGGAGGATCAGAATGACTATCATCAAAATGGGGAATTTAGTTTCAGAAAAGGTTGGAGGAAGAAAGGAAATAGTCCCTCGATTGACAGCGAGATCATGCGAAGTGGAGATCTTTTCAGCAGCACAACCAGCATGAGAGGAACCCTGAGTTATGCTGCTCCAGAATATGGTGGTTGTGAGGGGTTCTCAGTGGAGAAAACTGACATTTACAGTTTTGGAGTATTGATCCTTGTGATTGTTTCAGGAAGAAGACCATTACAAGTTCTTCCATCCTCATTGAAGCTTGAGAAAGCTAATTTAGTAAGCTGGTGCAAGCAATTGGCACAATCTGGCAACATTTTAGAACTTGCAGACGAGAGGTTGAGAGAAGATTATAACAAGGAGCAAGCAAGCTTGTGCATCAACATTGCACTTTCTTGCTTACAGAAAAATCCAGAATTAAGACCAGACATTGGGGATATTGTTAAGATTCTAAAGGGGGATATGAATCTACCACCAATTCCATTTGAGTTCTCTCCATCTCCACCTTTTAGACTGTACAGAAAATCATGA 2103 0.4051 MTSRSFPPTTDHHFFTKYKVLFLALTISASLVIFCTIFYFLYHLWYSVVHRAKTIPFDANSPLKLRRFSYKELKQATNGFHTENVIGKGGSSTVFKGKLNDGKSIAIKRLDALCIQTQQEFQNELQILGGLTSPFVVTLLGYCMEKNKRALVFEYMPKRSLQESLFGDERCLSLSWERRFLVILDVAKALEFLHLDCDPPVIHGDIKPSNVLLDEEHHAKISDFGLSRIKVEEGEFDGNMFSQDLGDKSQELWKSQEFSGNLTAGSPAADERVNEVDFALALQASSSSKYSRVGLNVGALNLNSLNYNAYISESEARTTSVKGKEILSFDIGGDDRRNEFVPCDDDFSNIDHSKELNVNASSVDKEKPSEKQRGKDWWWRQDESAELCSKDYVMEWIGSQIHPSNTDWDEEKNIHEETELGNKSPTDKIDDVHGPQFQAMGTKDADNGADENKESVEKKHHEKHRKMQELWKEENLGESSKNNGNLKNLQTKWKQGFKVPHFGLDRKFYLCRCRKFQREDQNDYHQNGEFSFRKGWRKKGNSPSIDSEIMRSGDLFSSTTSMRGTLSYAAPEYGGCEGFSVEKTDIYSFGVLILVIVSGRRPLQVLPSSLKLEKANLVSWCKQLAQSGNILELADERLREDYNKEQASLCINIALSCLQKNPELRPDIGDIVKILKGDMNLPPIPFEFSPSPPFRLYRKS 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5781g00008 700 ProSiteProfiles Protein kinase domain profile. 80 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5781g00008 700 Pfam Protein kinase domain 558 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5781g00008 700 Pfam Protein kinase domain 80 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5781g00008 700 Gene3D Phosphorylase Kinase; domain 1 55 155 - -
Pral5781g00008 700 Gene3D Transferase(Phosphotransferase) domain 1 156 263 - -
Pral5781g00008 700 Gene3D Transferase(Phosphotransferase) domain 1 521 681 - -
Pral5781g00008 700 SMART serkin_6 80 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5781g00008 700 MobiDBLite consensus disorder prediction 438 464 - -
Pral5781g00008 700 MobiDBLite consensus disorder prediction 446 464 - -
Pral5781g00008 700 SUPERFAMILY Protein kinase-like (PK-like) 59 693 IPR011009 -
Pral5781g00008 700 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Pral5781g00008 700 FunFam Receptor-like serine/threonine-protein kinase At4g25390 49 155 - -
Pral5781g00008 700 FunFam Os07g0541700 protein 156 245 - -
Pral5781g00008 700 PANTHER OS07G0586332 PROTEIN 7 700 IPR044576 -
Pral5781g00008 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5781g00008 Pral-Chr5781 54997 57463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5781g00008 559 675 Receptor kinase-like Gene Family AT3G58690 32.203 2.79e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pral5781g00008 Pkinase 3.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5781g00008 - - gmx:100807432 922.154